Gene omics information

Query gene ID GmaAffx.12540.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6786.1GmaAffx.12540.1.S1_atBE474761--1e-6At1g33770protein kinase family proteinS.X.H.G.
0.6786.1Gma.7924.3.S1_atBI787925--2e-3At4g24290-S.X.H.G.
0.6080.7GmaAffx.17305.1.S1_atBM524663--3e+0At5g61650CYCP4S.X.H.G.
0.5071.7Gma.7924.3.S1_a_atBI787925--2e-3At4g24290-S.X.H.G.
0.4057.1GmaAffx.92784.1.S1_atCF808509--3e-2At5g66850MAPKKK5S.X.H.G.
0.1619.7GmaAffx.62269.1.S1_atBU766031--3e-1At1g22280protein phosphatase 2C, putative / PP2C, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
3.496.4GSM209597susceptible_24hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
3.296.0GSM29416932_3137.2H.R9H2L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.195.8GSM2449338_VP9.I5U1.CEL, Experimental replicate 1GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
3.195.8GSM29277234_C197.1K.R9K3U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.195.8GSM2937639_3039.2C.R9C1L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.195.8GSM29323523_1537.1P.R044U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.095.6GSM29360333_2059.2B.R199L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.995.4GSM29388738_2229.2E.R022L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.995.4GSM29220870_C004.1A.R9A1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.995.4GSM29340890_C079.1Q.R9Q2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e-240GmaAffx.77277.1.S1_atBI471883--3e-14At5g50860protein kinase family proteinC.G.S.X.
0.031e+034PsAffx.C76000073_atPsAffx.C76000073--6e+0At4g37608unknown proteinC.G.S.X.
0.041e+034GmaAffx.88272.3.S1_atBM885843--1e-41At4g19110protein kinase, putativeC.G.S.X.
0.031e+034GmaAffx.88272.2.S1_atBG156388--1e-19At5g45430protein kinase, putativeC.G.S.X.
0.031e+034GmaAffx.24470.1.S1_atBU551132--1e+0At1g08340rac GTPase activating protein, putativeC.G.S.X.
0.025e+032PsAffx.C189000007_atPsAffx.C189000007--8e+0At4g18460D-Tyr-tRNA(Tyr) deacylase family proteinC.G.S.X.
0.015e+032PsAffx.C163000023_atPsAffx.C163000023--2e+0At5g15760plastid-specific 30S ribosomal protein 3, putative / PSRP-3, putativeC.G.S.X.
0.025e+032GmaAffx.87236.1.S1_atBI497935--1e-1At3g12630zinc finger (AN1-like) family proteinC.G.S.X.
0.035e+032GmaAffx.43996.1.A1_atBU549640--5e+0At5g63880VPS20.1C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.101e-654Arabidopsis thalianaAt1g33770840268protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:cellular_component unknown;MPOFBVA---C.G.S.X.
0.042e+032Hordeum vulgarebaak19i22_s_atbaak19i22--2e+0At3g53232RTFL1 (ROTUNDIFOLIA LIKE 1)C.G.S.X.
0.092e-654Oryza sativaOs.27867.1.S1_at---0C.G.S.X.
0.159e-857Populus trichocarpaPtpAffx.212322.1.S1_atpmrna24163hypothetical protein-9e-16At1g71530protein kinase family proteinC.G.S.X.
0.121e-963Triticum aestivumTaAffx.122050.1.S1_atCA650902--6e-20At1g53050protein kinase family proteinC.G.S.X.
0.034e+030Vitis vinifera1616333_atCF568895--3e-10At3g07090unknown proteinC.G.S.X.
0.061e-756Zea maysZm.14342.1.S1_atCA399127--2e-24At1g53050protein kinase family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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