Gene omics information

Query gene ID	Gma.9511.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.71	87.8	Gma.9511.1.S1_at	CA850830	-	-	8e-2	At5g64816	unknown protein	S.X.	H.G.	Please select
0.73	88.9	GmaAffx.85444.1.S1_at	BG405531	-	-	3e-1	At1g28630	unknown protein	S.X.	H.G.	Please select
0.67	86.1	Gma.3801.1.S1_at	BI497593	-	-	4e-15	At2g33770	PHO2 (PHOSPHATE 2)	S.X.	H.G.	Please select
0.61	81.8	GmaAffx.15471.3.S1_x_at	BE346777	MYB transcription factor MYB145	-	4e-9	At5g59780	MYB59 (MYB DOMAIN PROTEIN 59)	S.X.	H.G.	Please select
0.40	57.1	GmaAffx.15471.1.S1_at	BQ611747	-	-	1e-8	At5g59780	MYB59 (MYB DOMAIN PROTEIN 59)	S.X.	H.G.	Please select
0.36	50.8	GmaAffx.43786.2.S1_at	BU080930	-	-	4e-12	At2g17820	ATHK1 (histidine kinase 1)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
9.2	99.2	GSM294038	88_2282.2F.R224P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.6	98.9	GSM293996	4_2268.2F.R154P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.3	98.9	GSM293790	34_2150.2D.R295P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.1	98.8	GSM294345	92_2412.2I.R226P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.6	98.7	GSM292811	6_1406.1K.R251P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.6	98.7	GSM292603	32_1362.1I.R226P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.3	98.6	GSM292377	50_1228.1F.R139P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.3	98.6	GSM292686	35_1388.1J.R241P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.2	98.6	GSM292887	62_1458.1L.R279P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.1	98.5	GSM292533	47_1288.1H.R182P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.56	2e-105	383	GmaAffx.77655.1.S1_at	CA937165	-	-	8e-1	At1g19400	unknown protein	C.G.	S.X.	Please select
0.01	4e-1	36	PsAffx.C30000076_at	PsAffx.C30000076	-	-	4e-1	At1g15350	unknown protein	C.G.	S.X.	Please select
0.03	4e-1	36	GmaAffx.77173.1.S1_at	BG363225	-	-	1e+0	At5g13200	GRAM domain-containing protein / ABA-responsive protein-related	C.G.	S.X.	Please select
0.02	4e-1	36	GmaAffx.28750.1.S1_at	BI967217	-	-	1e-8	At2g26600	glycosyl hydrolase family 17 protein	C.G.	S.X.	Please select
0.02	4e-1	36	Gma.13248.1.S1_at	BM523367	-	-	2e-53	At3g08690	UBC11 (UBIQUITIN-CONJUGATING ENZYME 11)	C.G.	S.X.	Please select
0.03	2e+0	34	GmaAffx.91365.1.S1_at	CF807090	-	-	4e+0	At5g54745	DegP protease family	C.G.	S.X.	Please select
0.03	2e+0	34	GmaAffx.87042.1.S1_at	AW596159	-	-	1e-9	At4g12420	SKU5	C.G.	S.X.	Please select
0.03	2e+0	34	GmaAffx.85336.1.S1_at	BG047448	-	-	5e-18	At1g69510	-	C.G.	S.X.	Please select
0.03	2e+0	34	GmaAffx.63784.1.S1_at	BU547864	-	-	3e-1	At5g40040	60S acidic ribosomal protein P2 (RPP2E)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	8e-2	38	Arabidopsis thaliana	At5g64816	836604	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	6e-1	34	Hordeum vulgare	HM08L19r_at	HM08L19r	-	-	3e-2	At3g09980	unknown protein	C.G.	S.X.	Please select
0.03	2e+0	34	Oryza sativa	OsAffx.7786.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	4e-1	36	Populus trichocarpa	PtpAffx.95143.1.A1_at	CV258187	hypothetical protein	-	1e+0	At5g59810	SBT5.4	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	3e-1	36	Triticum aestivum	TaAffx.37052.1.S1_s_at	BJ303352	-	-	2e-2	At5g37550	unknown protein	C.G.	S.X.	Please select
0.03	4e-1	34	Vitis vinifera	1622018_at	CB978885	-	-	9e-7	At4g31320	auxin-responsive protein, putative / small auxin up RNA (SAUR_C)	C.G.	S.X.	Please select
0.04	5e-1	34	Zea mays	ZmAffx.262.1.A1_s_at	AI670379	acidic ribosomal protein P3	-	3e+0	At4g27410	RD26 (RESPONSIVE TO DESICCATION 26)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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