CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Gma.8705.1.S1_at

Gene name

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.80 91.5 Gma.8705.1.S1_at BQ742642 - - 1e-23 At1g65430 zinc finger protein-related S.X. H.G.
0.67 86.1 Gma.2520.1.S1_at AW570245 - - 2e-7 At2g46500 phosphatidylinositol 3- and 4-kinase family protein / ubiquitin family protein S.X. H.G.
0.53 74.2 Gma.6902.1.S1_a_at CD396278 - - 1e-12 At5g01010 - S.X. H.G.
0.44 63.3 Gma.2660.1.S1_at BE657176 - - 9e-13 At1g69060 heat shock protein binding S.X. H.G.
0.40 57.1 Gma.8578.1.S1_at BQ079840 - - 4e-26 At3g60150 unknown protein S.X. H.G.
0.36 50.8 Gma.9738.1.S1_at CA938669 - - 3e-7 At4g20330 transcription initiation factor-related S.X. H.G.
0.25 32.6 Gma.17071.1.S1_at BE822434 - - 6e-2 At1g43890 ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.2 97.4 GSM293137 4_C053.1O.R9O3U, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.8 97.0 GSM292161 14-C017.1A.R9A3L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.8 97.0 GSM293113 28_C047.1O.R9O2L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.7 96.8 GSM292730 75_C165.1J.R9J1L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.6 96.7 GSM293112 27_C047.1O.R9O2U, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1 95.8 GSM293803 46_3065.2D.R9D2L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1 95.8 GSM292292 39_C075.1E.R9E1L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1 95.8 GSM292170 26-C003.1A.R9A1U, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.8 95.1 GSM292274 19_C089.1E.R9E3L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.8 95.1 GSM292330 77_C077.1E.SLE1L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.21 8e-38 159 GmaAffx.661.1.S1_at BI969786 - - 2e+0 At1g67080 ABA4 (abscisic acid (ABA)-deficient 4) C.G. S.X.
0.02 2e-1 38 GmaAffx.92525.1.S1_s_at CF808250 - - 3e-4 At2g45570 CYP76C2 C.G. S.X.
0.02 2e-1 38 Gma.17686.1.S1_at BF597378 - - 6e-4 At2g45570 CYP76C2 C.G. S.X.
0.02 8e-1 36 PsAffx.CL465Contig1_at PsAffx.CL465Contig1 - - 6e-1 At5g59830 unknown protein C.G. S.X.
0.02 8e-1 36 GmaAffx.27908.1.A1_at BI969540 - - 3e+0 At3g17510 CIPK1 (CBL-INTERACTING PROTEIN KINASE 1) C.G. S.X.
0.02 8e-1 36 Gma.5323.1.A1_s_at CD402653 - - 4e-41 At5g59690 histone H4 C.G. S.X.
0.02 8e-1 36 Gma.14873.1.S1_at CD487575 - - 1e-44 At1g07820 histone H4 C.G. S.X.
0.01 3e+0 34 PsAffx.C78000035_at PsAffx.C78000035 - - 2e-1 At3g11070 outer membrane OMP85 family protein C.G. S.X.
0.00 3e+0 34 PsAffx.C7000230_at PsAffx.C7000230 - - 5e+0 At3g50980 XERO1 (DEHYDRIN XERO 1) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.13 1e-23 111 Arabidopsis thaliana At1g65430 842854 zinc finger protein-related F:ubiquitin-protein ligase activity;P:unknown;C:intracellular;MOPFV - - - C.G. S.X.
0.14 1e-15 83 Hordeum vulgare Contig7084_at Contig7084 - - 2e-35 At2g31510 IBR domain-containing protein / ARIADNE-like protein ARI7 (ARI7) C.G. S.X.
0.08 3e-7 57 Oryza sativa Os04g0492100 AK060196.1 - ARIADNE-like protein 2e-45 At2g31510 IBR domain-containing protein / ARIADNE-like protein ARI7 (ARI7) C.G. S.X.
0.30 2e-32 141 Populus trichocarpa Ptp.7870.2.S1_at DN499526 hypothetical protein - 1e-53 At1g65430 zinc finger protein-related C.G. S.X.
0.20 5e-17 89 Triticum aestivum Ta.14264.1.A1_at BQ842602 - - 1e-10 At1g65430 zinc finger protein-related C.G. S.X.
0.05 1e-2 40 Vitis vinifera 1620666_at CB346885 hypothetical protein LOC100257000 - 2e-12 At2g31510 IBR domain-containing protein / ARIADNE-like protein ARI7 (ARI7) C.G. S.X.
0.07 3e-10 65 Zea mays Zm.11365.2.A1_a_at CF632262 - - 6e-6 At2g31760 zinc finger protein-related C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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