CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Gma.8652.1.A1_at

Gene name

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.73 88.9 Gma.8652.1.A1_at CD407809 - - 3e-1 At1g48160 signal recognition particle 19 kDa protein, putative / SRP19, putative S.X. H.G.
0.67 86.1 Gma.4136.1.S1_at BE824037 - - 4e-20 At5g05230 ubiquitin-protein ligase S.X. H.G.
0.67 86.1 Gma.12593.1.S1_a_at BE823660 - - 6e-9 At2g32170 - S.X. H.G.
0.55 76.3 Gma.12601.1.S1_at CD392236 - - 6e-50 At5g67320 HOS15 (high expression of osmotically responsive genes 15) S.X. H.G.
0.46 65.5 Gma.8066.1.A1_at BQ611504 - - 1e-1 At1g54170 CID3 (CTC-Interacting Domain 3) S.X. H.G.
0.44 63.3 Gma.13242.1.S1_at CD396483 NAC domain protein - 1e-5 At5g64060 anac103 (Arabidopsis NAC domain containing protein 103) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
6.7 98.7 GSM292373 47_C104.1F.R9F3P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.6 98.7 GSM293126 3_C038.1O.R9O1P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.9 98.0 GSM294218 69_3140.2H.R9H3P_new, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.8 97.9 GSM293105 20_C054.1O.R9O3P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.6 97.7 GSM292575 85_C136.1H.R9H2P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.6 97.7 GSM292969 47_C222.1M.R9M1P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.4 97.6 GSM293480 66_C092.1R.R9R1P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.4 97.6 GSM293419 10_C108.1R.R9R3P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.3 97.5 GSM294197 4_3138.2H.R9H2P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.2 97.4 GSM293060 61_C034.1N.R9N3P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 4e-1 36 PsAffx.psMA019xJ02f_at PsAffx.psMA019xJ02f - - 1e+0 At5g40790 unknown protein C.G. S.X.
0.02 4e-1 36 PsAffx.C176000007_at PsAffx.C176000007 - - 5e-1 At1g66045 unknown protein C.G. S.X.
0.04 2e+0 34 GmaAffx.75046.1.A1_at CD397897 - - 3e+0 At1g79450 ALIS5 (ALA-Interacting Subunit 5) C.G. S.X.
0.03 2e+0 34 GmaAffx.12485.1.S1_at BE347146 - - 4e-3 At5g08120 MBP2C (MICROTUBULE BINDING PROTEIN 2C) C.G. S.X.
0.00 6e+0 32 PsAffx.C7000230_at PsAffx.C7000230 - - 5e+0 At3g50980 XERO1 (DEHYDRIN XERO 1) C.G. S.X.
0.01 6e+0 32 PsAffx.C286000003_at PsAffx.C286000003 - - 2e+0 At4g30050 unknown protein C.G. S.X.
0.01 6e+0 32 PsAffx.C132000013_at PsAffx.C132000013 - - 3e+0 At3g06980 DEAD/DEAH box helicase, putative C.G. S.X.
0.02 6e+0 32 PsAffx.C125000040_at PsAffx.C125000040 - - 8e+0 At1g49140 NADH-ubiquinone oxidoreductase-related C.G. S.X.
0.03 6e+0 32 HgAffx.18857.1.S1_at CA940323 - - 4e+0 At4g39930 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 3e-1 36 Arabidopsis thaliana At1g48160 841235 signal recognition particle 19 kDa protein, putative / SRP19, putative F:7S RNA binding;P:protein targeting, SRP-dependent cotranslational protein targeting to membrane;C:signal recognition particle, signal recognition particle, endoplasmic reticulum targeting;MFAOP - - - C.G. S.X.
0.03 2e+0 32 Hordeum vulgare HY06I17u_at HY06I17u - - 3e+0 At5g08190 NF-YB12 (NUCLEAR FACTOR Y, SUBUNIT B12) C.G. S.X.
0.04 2e+0 34 Oryza sativa Os12g0584400 9640.m03851 - - 3e+0 At3g09730 unknown protein C.G. S.X.
0.04 2e+0 34 Populus trichocarpa PtpAffx.132095.1.A1_at DN490977 hypothetical protein - 8e+0 At5g56369 - C.G. S.X.
0.04 5e+0 32 Triticum aestivum TaAffx.115188.1.S1_at CA484502 - - 4e+0 At4g05230 ubiquitin family protein C.G. S.X.
0.03 5e+0 30 Vitis vinifera 1622703_at CF513128 - - 5e-3 At4g25660 unknown protein C.G. S.X.
0.03 2e+0 32 Zea mays Zm.4529.2.S1_at BM333157 - - 8e+0 Atmg00050 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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