Gene omics information

Query gene ID	Gma.8530.1.S1_at
Gene name	seed maturation protein PM35
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.72	88.1	Gma.8530.1.S1_at	AF109720.1	seed maturation protein PM35	-	8e-2	At4g31370	FLA5 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 5 PRECURSOR)	S.X.	H.G.	Please select
0.55	76.3	Gma.1502.2.S1_a_at	BI974382	glutathione S-transferase GST 14	-	5e-5	At2g29490	ATGSTU1 (GLUTATHIONE S-TRANSFERASE TAU 1)	S.X.	H.G.	Please select
0.50	71.7	Gma.339.1.S1_s_at	AF048978.1	2,4-D inducible glutathione S-transferase	-	2e-28	At1g78340	ATGSTU22 (GLUTATHIONE S-TRANSFERASE TAU 22)	S.X.	H.G.	Please select
0.50	71.7	Gma.2433.1.S1_at	AW349260	-	-	3e-6	At2g29490	ATGSTU1 (GLUTATHIONE S-TRANSFERASE TAU 1)	S.X.	H.G.	Please select
0.49	68.3	Gma.1502.1.S1_at	AF243369.1	glutathione S-transferase GST 14	-	5e-7	At2g29460	ATGSTU4 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 4)	S.X.	H.G.	Please select
0.48	67.7	GmaAffx.67309.1.S1_at	BE609999	-	-	2e-8	At3g29360	UDP-glucose 6-dehydrogenase, putative	S.X.	H.G.	Please select
0.44	63.3	GmaAffx.93186.1.S1_s_at	CF808911	glutathione S-transferase GST 14	-	1e-6	At2g29490	ATGSTU1 (GLUTATHIONE S-TRANSFERASE TAU 1)	S.X.	H.G.	Please select
0.44	63.3	GmaAffx.91971.1.S1_s_at	CF807696	-	-	1e+0	At1g18360	hydrolase, alpha/beta fold family protein	S.X.	H.G.	Please select
0.43	60.6	GmaAffx.92964.1.S1_at	CF808689	-	-	2e+0	At3g26147	unknown protein	S.X.	H.G.	Please select
0.39	54.5	GmaAffx.91037.1.S1_s_at	CF806762	-	-	4e-4	At2g41380	embryo-abundant protein-related	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
43.4	99.9	GSM293584	16_2089.2B.R181U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
36.3	99.9	GSM309345	transgenic RNAiOleosin, biol rep 2, tech rep 1	GSE12300	Suppression of oleosin in soybean cotyledon
34.0	99.9	GSM309346	transgenic RNAiOleosin, biol rep 2, tech rep 2	GSE12300	Suppression of oleosin in soybean cotyledon
30.2	99.8	GSM309343	transgenic RNAiOleosin, biol rep 1, tech rep 1	GSE12300	Suppression of oleosin in soybean cotyledon
27.6	99.8	GSM309344	transgenic RNAiOleosin, biol rep 1, tech rep 2	GSE12300	Suppression of oleosin in soybean cotyledon
23.4	99.8	GSM293950	95_2213.2E.R168U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
23.2	99.8	GSM294098	55_2291.2G.R251L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
23.1	99.8	GSM294409	66_3169.2J.R9J2U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
21.3	99.8	GSM293546	60_2021.2A.R275L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
20.1	99.7	GSM294089	47_3111.2G.R9G1U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	3e-2	40	Gma.4116.1.S1_a_at	CD417209	-	-	2e-7	At4g20330	transcription initiation factor-related	C.G.	S.X.	Please select
0.03	4e-1	36	PsAffx.psMY003iB05r_at	PsAffx.psMY003iB05r	-	-	2e+1	At4g37409	unknown protein	C.G.	S.X.	Please select
0.01	4e-1	36	PsAffx.C152000027_at	PsAffx.C152000027	-	-	1e+0	At4g15140	unknown protein	C.G.	S.X.	Please select
0.01	4e-1	36	PsAffx.C107000007_at	PsAffx.C107000007	-	-	4e-1	At2g45510	CYP704A2	C.G.	S.X.	Please select
0.04	4e-1	36	Gma.17001.1.A1_at	BE821046	-	-	3e+0	At4g38230	CPK26	C.G.	S.X.	Please select
0.01	2e+0	34	PsAffx.C73000037_at	PsAffx.C73000037	-	-	4e+0	At5g53590	auxin-responsive family protein	C.G.	S.X.	Please select
0.01	2e+0	34	PsAffx.C27000105_at	PsAffx.C27000105	-	-	4e-3	At4g17950	DNA-binding family protein	C.G.	S.X.	Please select
0.01	2e+0	34	PsAffx.C113000037_at	PsAffx.C113000037	-	-	1e+0	At4g15690	glutaredoxin family protein	C.G.	S.X.	Please select
0.02	2e+0	34	GmaAffx.16165.1.S1_at	BI427044	-	-	9e-12	At3g11240	ATE2 (ARGININE-TRNA PROTEIN TRANSFERASE 2)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	8e-2	38	Arabidopsis thaliana	At4g31370	829264	FLA5 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 5 PRECURSOR)	fasciclin-like arabinogalactan-protein, putative (FLA5)	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	6e-1	34	Hordeum vulgare	Contig18615_at	Contig18615	-	-	2e+0	At1g55520	TBP2 (TATA BINDING PROTEIN 2)	C.G.	S.X.	Please select
0.05	2e+0	34	Oryza sativa	OsAffx.13725.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	2e+0	34	Populus trichocarpa	PtpAffx.218640.1.S1_at	pmrna34334	hypothetical protein	-	3e-1	At3g22780	TSO1 (CHINESE FOR 'UGLY')	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	1e+0	34	Triticum aestivum	TaAffx.12853.1.S1_at	BJ226698	-	-	2e-1	At4g09270	unknown protein	C.G.	S.X.	Please select
0.03	1e+0	32	Vitis vinifera	1618836_at	BQ798755	homogentisate geranylgeranyl transferase	-	8e-11	At2g18950	HPT1 (HOMOGENTISATE PHYTYLTRANSFERASE 1)	C.G.	S.X.	Please select
0.04	3e-2	38	Zea mays	Zm.13249.2.S1_at	CF012746	-	-	1e+0	At1g35255	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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