CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Gma.8182.1.S1_a_at

Gene name

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.80 91.5 Gma.8182.1.S1_a_at CD401769 - - 5e-12 At1g65230 unknown protein S.X. H.G.
0.91 98.6 Gma.2503.1.S1_s_at AF503361.1 oxidoreductase /// conversion of hydroxypyruvate to glycerate - 6e-94 At1g68010 HPR S.X. H.G.
0.83 92.5 Gma.7210.1.S1_at BE822041 - - 3e-52 At4g11960 PGRL1B (PGR5-Like B) S.X. H.G.
0.67 86.1 Gma.10620.1.S1_at AF503360.1 conversion of hydroxypyruvate to glycerate - 4e-89 At1g68010 HPR S.X. H.G.
0.67 86.1 Gma.7309.1.S1_at CD396548 peroxisomal glycolate oxidase - 1e-113 At3g14415 (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative S.X. H.G.
0.50 71.7 Gma.2503.1.S1_at AF503361.1 oxidoreductase - 6e-94 At1g68010 HPR S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
105.0 100.0 GSM245933 Leaf_Water Control_Rep 1_48 h After Treatment GSE9730 Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
101.7 100.0 GSM245935 Leaf_Water Control_Rep 3_48 h After Treatment GSE9730 Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
96.4 100.0 GSM245934 Leaf_Water Control_Rep 2_48 h After Treatment GSE9730 Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
95.1 100.0 GSM209582 mock_0hours_rep2 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
93.1 100.0 GSM245936 Leaf_LCO treated_Rep 1_48 h After Treatment GSE9730 Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
87.0 100.0 GSM238057 Soybean-S03W4-1-RMA GSE9374 Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
76.2 100.0 GSM209591 mock_0hours_rep3 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
73.1 100.0 GSM245938 Leaf_LCO treated_Rep 3_48 h After Treatment GSE9730 Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
72.3 100.0 GSM238041 Soybean-Bayfield-4-RMA GSE9374 Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
69.4 100.0 GSM209581 susceptible_48hours_rep1 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 4e-1 36 Gma.9172.1.S1_at BM308207 - - 1e-10 At3g62140 unknown protein C.G. S.X.
0.03 4e-1 36 Gma.1715.1.S1_at BE191618 - - 2e-2 At1g71691 GDSL-motif lipase/hydrolase family protein C.G. S.X.
0.00 2e+0 34 PsAffx.C55000005_at PsAffx.C55000005 - - 1e-18 At1g80070 SUS2 (ABNORMAL SUSPENSOR 2) C.G. S.X.
0.04 2e+0 34 HgAffx.17851.1.S1_at CB278539 - - 1e-1 At4g35070 - C.G. S.X.
0.03 2e+0 34 GmaAffx.83792.1.S1_at BI785448 - - 9e-26 At4g34740 ATASE2 (GLN PHOSPHORIBOSYL PYROPHOSPHATE AMIDOTRANSFERASE 2) C.G. S.X.
0.03 2e+0 34 GmaAffx.83107.1.S1_at BQ296672 - - 2e-1 At2g04380 unknown protein C.G. S.X.
0.02 2e+0 34 Gma.2119.1.S1_at BU081878 - - 3e-40 At5g03650 SBE2.2 (starch branching enzyme 2.2) C.G. S.X.
0.02 7e+0 32 PsAffx.CL565Contig1_at PsAffx.CL565Contig1 - - 2e+0 At1g34000 OHP2 (ONE-HELIX PROTEIN 2) C.G. S.X.
0.02 7e+0 32 PsAffx.C42000047_at PsAffx.C42000047 - - 7e-5 At1g07150 MAPKKK13 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.11 5e-12 71 Arabidopsis thaliana At1g65230 842830 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PB - - - C.G. S.X.
0.04 6e-1 34 Hordeum vulgare baak1h04_s_at baak1h04 - - 3e+0 At5g03370 acylphosphatase family C.G. S.X.
0.06 2e-7 57 Oryza sativa Os01g0912700 AK068528.1 - Conserved hypothetical protein 1e-1 At2g01340 unknown protein C.G. S.X.
0.23 8e-18 91 Populus trichocarpa PtpAffx.37259.1.A1_a_at CV276577 hypothetical protein - 1e-11 At1g65230 unknown protein C.G. S.X.
0.03 1e+0 34 Triticum aestivum TaAffx.24051.1.S1_at CA725550 - - 8e-1 At3g61460 BRH1 (BRASSINOSTEROID-RESPONSIVE RING-H2) C.G. S.X.
0.15 4e-13 73 Vitis vinifera 1611238_at CD799234 hypothetical protein LOC100263239 - 5e-6 At1g65230 unknown protein C.G. S.X.
0.03 5e-1 34 Zea mays Zm.2994.1.S1_at AW146913 - - 2e+1 At5g18900 oxidoreductase, 2OG-Fe(II) oxygenase family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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