Gene omics information

Query gene ID	Gma.8031.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	86.1	Gma.8031.1.S1_at	BE823105	-	-	4e-76	At4g12590	unknown protein	S.X.	H.G.	Please select
0.67	86.1	Gma.13142.2.S1_a_at	BF069870	-	-	2e-13	At5g15220	ribosomal protein L27 family protein	S.X.	H.G.	Please select
0.64	83.4	Gma.4344.2.S1_a_at	BI700879	-	-	1e-79	At4g24820	26S proteasome regulatory subunit, putative (RPN7)	S.X.	H.G.	Please select
0.64	83.4	GmaAffx.88721.1.S1_s_at	CK606003	-	-	5e-12	At1g75990	26S proteasome regulatory subunit S3, putative (RPN3)	S.X.	H.G.	Please select
0.60	80.7	GmaAffx.92455.1.S1_s_at	CF808180	-	-	5e-34	At5g42790	PAF1	S.X.	H.G.	Please select
0.58	78.8	GmaAffx.14686.2.S1_s_at	AW756251	-	-	5e-24	At1g65650	UCH2	S.X.	H.G.	Please select
0.57	78.8	Gma.17742.1.S1_at	BF599092	-	-	1e-12	At4g29330	DER1 (DERLIN-1)	S.X.	H.G.	Please select
0.55	76.3	GmaAffx.93620.1.S1_s_at	CF809345	-	-	3e-19	At3g61140	FUS6 (FUSCA 6)	S.X.	H.G.	Please select
0.53	74.2	Gma.8031.3.S1_a_at	AW704196	-	-	8e-8	At4g12590	unknown protein	S.X.	H.G.	Please select
0.53	74.2	GmaAffx.91569.1.S1_s_at	CF807294	-	-	7e-52	At1g21720	PBC1 (PROTEASOME BETA SUBUNIT C1)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.0	95.6	GSM293601	31_2069.2B.R213L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.8	95.1	GSM293333	22_1549.1Q.R078L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.6	94.5	GSM244898	38_CON.M1W4.CEL, Experimental replicate 4	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
2.5	94.2	GSM244788	12_V71.M1W1.CEL, Experimental replicate 1	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
2.5	94.2	GSM244840	24_VP9.M1W4.CEL, Experimental replicate 4	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
2.4	93.8	GSM293259	45_1179.1P.R110U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.4	93.8	GSM293217	97_1131.1O.R083U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.4	93.8	GSM244926	7_SLO.I1W4.CEL, Experimental replicate 4	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
2.4	93.8	GSM244833	22_VP9.M1W1.CEL, Experimental replicate 1	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
2.4	93.8	GSM294636	10_2601.2M.R299L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.47	2e-168	593	Gma.8031.3.S1_a_at	AW704196	-	-	8e-8	At4g12590	unknown protein	C.G.	S.X.	Please select
0.27	4e-92	339	Gma.8031.2.S1_at	BU547413	-	-	4e-16	At4g12590	unknown protein	C.G.	S.X.	Please select
0.02	1e-2	42	GmaAffx.87831.1.S1_at	BF069166	-	-	2e-17	At3g53760	tubulin family protein	C.G.	S.X.	Please select
0.03	2e-1	38	Gma.8226.3.S1_a_at	AI901045	-	-	1e-9	At5g58960	GIL1 (GRAVITROPIC IN THE LIGHT)	C.G.	S.X.	Please select
0.01	9e-1	36	PsAffx.C459000002_at	PsAffx.C459000002	-	-	3e-1	At3g60660	unknown protein	C.G.	S.X.	Please select
0.01	9e-1	36	Gma.6883.3.S1_x_at	BI699466	-	-	4e+0	At2g17442	unknown protein	C.G.	S.X.	Please select
0.00	4e+0	34	PsAffx.C86000046_at	PsAffx.C86000046	-	-	3e+0	At1g80170	polygalacturonase, putative / pectinase, putative	C.G.	S.X.	Please select
0.01	4e+0	34	PsAffx.C86000049_at	PsAffx.C86000049	-	-	1e+0	At5g48760	60S ribosomal protein L13A (RPL13aD)	C.G.	S.X.	Please select
0.01	4e+0	34	PsAffx.C57000047_at	PsAffx.C57000047	-	-	4e+0	At1g09932	phosphoglycerate/bisphosphoglycerate mutase-related	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.43	4e-76	286	Arabidopsis thaliana	At4g12590	826872	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:mitochondrion, endoplasmic reticulum;MFOP	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.21	5e-37	155	Hordeum vulgare	Contig5182_at	Contig5182	-	-	9e-34	At4g12590	unknown protein	C.G.	S.X.	Please select
0.24	3e-41	171	Oryza sativa	Os09g0497400	AK068677.1	-	Eukaryotic protein of unknown function DUF850family protein	5e-32	At4g12590	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.50	1e-110	400	Populus trichocarpa	PtpAffx.6864.1.S1_at	CN550052	hypothetical protein	-	2e-96	At4g12590	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.24	4e-33	143	Triticum aestivum	Ta.6467.2.A1_at	CK163835	-	-	1e-32	At4g12590	unknown protein	C.G.	S.X.	Please select
0.51	5e-119	426	Vitis vinifera	1613866_s_at	CF510932	hypothetical protein LOC100245100	-	2e-68	At4g12590	unknown protein	C.G.	S.X.	Please select
0.21	1e-37	157	Zea mays	Zm.7045.1.A1_at	AY108667.1	protein pob	-	2e-37	At4g12590	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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