Gene omics information

Query gene ID Gma.7412.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7790.3Gma.7412.1.S1_atCD412844--4e-78At1g75630AVA-P4S.X.H.G.
0.5071.7Gma.15807.1.A1_atCD410831--1e+0At2g17442unknown proteinS.X.H.G.
0.4665.5Gma.8672.1.A1_atBU764295--8e-1At2g01650PUX2 (PLANT UBX DOMAIN-CONTAINING PROTEIN 2)S.X.H.G.
0.2735.7Gma.3275.1.S1_atBG651349--7e-28At5g42090-S.X.H.G.
0.1923.7GmaAffx.14960.1.S1_s_atBQ630244EREBP/AP2 transcription factor-2e+0At5g34828-S.X.H.G.
0.1923.7Gma.17407.1.S1_atBG650554--6e-22At4g30600signal recognition particle receptor alpha subunit family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
5.698.3GSM201120Laser capture microdissected (LCM) seed coat hourglass at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
4.897.9GSM191087Soybean_Cotyledon_II1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stage
4.797.8GSM201121Laser capture microdissected (LCM) seed coat hourglass at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
4.697.7GSM201129Whole Seed at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
4.497.6GSM191088Soybean_Cotyledon_II2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stage
3.997.1GSM209577susceptible_12hours_rep1GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
3.696.7GSM201130Laser capture microdissected (LCM) endosperm at the heart stage, biological replicate 3GSE7511Expression data from soybean seed compartments with embryos at the heart stage
3.696.7GSM209583resistant_6hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
3.496.4GSM209574resistant_6hours_rep1GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
3.396.2GSM209578resistant_24hours_rep1 *failed QC*GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.385e-94345Gma.11144.1.S1_atBE820412--3e-107At4g34720AVA-P1C.G.S.X.
0.385e-94345Gma.11144.1.S1_a_atBE820412--3e-107At4g34720AVA-P1C.G.S.X.
0.385e-94345Gma.11144.1.S1_x_atBE820412--3e-107At4g34720AVA-P1C.G.S.X.
0.318e-93341GmaAffx.27321.1.S1_s_atBG551437--5e-1At3g06420ATG8H (autophagy 8h)C.G.S.X.
0.452e-78293Gma.12504.1.S1_atCD393758--3e-88At1g19910AVA-P2C.G.S.X.
0.486e-72272GmaAffx.92173.1.S1_s_atCF807898--6e-86At4g34720AVA-P1C.G.S.X.
0.361e-66254Gma.11144.3.S1_x_atCD390963--4e-82At4g34720AVA-P1C.G.S.X.
0.361e-66254Gma.11144.3.S1_s_atCD390963--4e-82At4g34720AVA-P1C.G.S.X.
0.251e-35151Gma.11144.2.S1_a_atCD401702--7e-61At1g75630AVA-P4C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.564e-78291Arabidopsis thalianaAt1g75630843898AVA-P4vacuolar H+-pumping ATPase 16 kD proteolipid (ava-p) mRNA,---C.G.S.X.
0.447e-66250Hordeum vulgareContig2159_atContig2159--7e-68At1g75630AVA-P4C.G.S.X.
0.403e-53210Oryza sativaOs12g0168900AK071641.1--4e-51At4g38920ATVHA-C3 (VACUOLAR-TYPE H(+)-ATPASE C3)C.G.S.X.
0.451e-72274Populus trichocarpaPtpAffx.5430.3.S1_a_atCV242643hypothetical protein-1e-112At1g19910AVA-P2C.G.S.X.
0.494e-60232Triticum aestivumTaAffx.85981.4.S1_atCA626243--2e-60At4g38920ATVHA-C3 (VACUOLAR-TYPE H(+)-ATPASE C3)C.G.S.X.
0.469e-83305Vitis vinifera1606789_atCF415022similar to vacuolar ATP synthase 16 kDa proteolipid subunit 5 / V-ATPase 16 kDa proteolipid subunit 5 (AVAP5)-7e-83At4g34720AVA-P1C.G.S.X.
0.393e-62238Zea maysZm.1067.1.A1_atBM267163V-type H+-ATPase-3e-70At1g75630AVA-P4C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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