Gene omics information

Query gene ID	Gma.739.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	86.1	Gma.739.1.S1_at	BG882670	-	-	6e-15	At5g27490	integral membrane Yip1 family protein	S.X.	H.G.	Please select
0.46	65.5	GmaAffx.67599.1.S1_at	BM086517	-	-	7e-14	At3g56740	ubiquitin-associated (UBA)/TS-N domain-containing protein	S.X.	H.G.	Please select
0.40	57.1	GmaAffx.86610.1.S1_s_at	BI316625	-	-	3e-6	At3g42050	vacuolar ATP synthase subunit H family protein	S.X.	H.G.	Please select
0.31	42.2	GmaAffx.22627.1.S1_x_at	BG352722	-	-	4e-2	At1g18520	TET11 (TETRASPANIN11)	S.X.	H.G.	Please select
0.26	33.9	GmaAffx.93138.1.S1_s_at	CF808863	-	-	2e-27	At2g32080	PUR ALPHA-1	S.X.	H.G.	Please select
0.22	28.1	Gma.13169.1.S1_at	BU084294	-	-	1e-48	At3g01150	PTB1 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 1)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
7.0	98.8	GSM308559	Mature Soybean (Glycine max) pollen grains Replicate 2	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
6.6	98.7	GSM308560	Mature Soybean (Glycine max) pollen grains Replicate 3	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
3.6	96.7	GSM308556	Mature Soybean (Glycine max) pollen grains replicate 1	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
2.7	94.8	GSM292886	61_1483.1L.R292U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.5	94.2	GSM292897	71_1469.1L.R285L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.4	93.8	GSM294048	97_2249.2F.R268L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.3	93.3	GSM293950	95_2213.2E.R168U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.3	93.3	GSM293284	68_1533.1P.R026L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.3	93.3	GSM293532	48_2019.2A.R192U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.3	93.3	GSM292862	3_C201.1L.R9L1U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	3e-8	59	Gma.739.2.A1_at	BM121549	-	-	2e-8	At3g05280	integral membrane Yip1 family protein	C.G.	S.X.	Please select
0.03	3e-2	40	GmaAffx.80050.1.S1_at	AW201607	-	-	4e-1	At5g20736	unknown protein	C.G.	S.X.	Please select
0.01	2e+0	34	PsAffx.C10000089_at	PsAffx.C10000089	-	-	5e-1	At3g03270	universal stress protein (USP) family protein / early nodulin ENOD18 family protein	C.G.	S.X.	Please select
0.02	7e+0	32	PsAffx.psZS008xM04f_at	PsAffx.psZS008xM04f	-	-	5e+0	At5g07960	unknown protein	C.G.	S.X.	Please select
0.02	7e+0	32	PsAffx.CL87Contig2_s_at	PsAffx.CL87Contig2	-	-	1e+0	At1g60010	unknown protein	C.G.	S.X.	Please select
0.01	7e+0	32	PsAffx.C35000088_s_at	PsAffx.C35000088	-	-	4e-1	At5g54460	wound-responsive protein-related	C.G.	S.X.	Please select
0.01	7e+0	32	PsAffx.C20000121_at	PsAffx.C20000121	-	-	2e+0	At1g53120	RNA-binding S4 domain-containing protein	C.G.	S.X.	Please select
0.01	7e+0	32	PsAffx.C193000006_at	PsAffx.C193000006	-	-	1e-2	At5g66460	(1-4)-beta-mannan endohydrolase, putative	C.G.	S.X.	Please select
0.03	7e+0	32	HgAffx.16299.1.S1_at	CB280057	-	-	1e+0	At2g18969	-	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.33	6e-15	81	Arabidopsis thaliana	At5g27490	832808	integral membrane Yip1 family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFP	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	3e+0	32	Hordeum vulgare	rbah33e14_s_at	rbah33e14	-	-	4e+0	At5g22580	-	C.G.	S.X.	Please select
0.10	4e-5	50	Oryza sativa	Os01g0610500	AK105469.1	-	Conserved hypothetical protein	1e-14	At3g05280	integral membrane Yip1 family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.49	3e-67	256	Populus trichocarpa	PtpAffx.675.5.S1_at	CF227425	hypothetical protein	-	4e-45	At5g27490	integral membrane Yip1 family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	3e-1	36	Triticum aestivum	TaAffx.106041.1.S1_at	CA725501	Pre-FBPase protein	-	1e-2	At2g42760	unknown protein	C.G.	S.X.	Please select
0.39	2e-30	131	Vitis vinifera	1622567_at	CF516028	hypothetical protein LOC100266603	-	2e-20	At5g27490	integral membrane Yip1 family protein	C.G.	S.X.	Please select
0.04	9e+0	30	Zea mays	Zm.3919.1.S1_at	BG840867	hypothetical protein LOC100194180	-	7e-16	At3g05280	integral membrane Yip1 family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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