CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Gma.7325.1.S1_at

Gene name

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.6 Gma.7325.1.S1_at BI893997 - - 2e+0 At1g53625 unknown protein S.X. H.G.
0.53 74.2 Gma.5099.2.A1_at BE821425 - - 4e-1 At1g34380 5'-3' exonuclease family protein S.X. H.G.
0.50 71.7 Gma.10810.1.S1_s_at AW397258 - - 2e+0 At5g37680 ATARLA1A (ADP-ribosylation factor-like A1A) S.X. H.G.
0.35 48.6 GmaAffx.2047.1.S1_at CA801759 - - 2e-14 At3g28570 AAA-type ATPase family protein S.X. H.G.
0.16 19.7 Gma.11238.1.S1_at BQ454110 - - 3e-121 At5g60600 HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE) S.X. H.G.
0.15 18.7 GmaAffx.77778.1.S1_at AW185540 - - 5e+0 At5g52480 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
15.5 99.6 GSM209593 susceptible_6hours_rep3 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
14.1 99.6 GSM293113 28_C047.1O.R9O2L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
11.8 99.4 GSM209595 susceptible_12hours_rep3 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
9.5 99.2 GSM294169 32_3137.2H.R9H2L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.5 99.2 GSM209586 susceptible_12hours_rep2 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
9.4 99.2 GSM294238 87_2337.2H.R240L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.3 99.2 GSM293112 27_C047.1O.R9O2U, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.9 99.2 GSM292170 26-C003.1A.R9A1U, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.0 99.0 GSM209592 resistant_6hours_rep3 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
7.5 98.9 GSM292289 36_C081.1E.SLE2L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.32 2e-124 446 Gma.13764.1.A1_at BU545613 - - 3e-5 At1g13030 sphere organelles protein-related C.G. S.X.
0.01 5e-1 36 PsAffx.C61000044_s_at PsAffx.C61000044 - - 4e-1 At5g40490 RNA recognition motif (RRM)-containing protein C.G. S.X.
0.01 5e-1 36 PsAffx.C1053000001_at PsAffx.C1053000001 - - 4e+0 At2g33620 DNA-binding family protein / AT-hook protein 1 (AHP1) C.G. S.X.
0.01 2e+0 34 PsAffx.C5000092_at PsAffx.C5000092 - - 4e-1 At5g22340 unknown protein C.G. S.X.
0.02 2e+0 34 GmaAffx.66378.1.S1_at BU761461 - - 6e+0 At5g25102 unknown protein C.G. S.X.
0.02 8e+0 32 PsAffx.C77000013_at PsAffx.C77000013 - - 5e-1 At3g12100 cation efflux family protein / metal tolerance protein, putative C.G. S.X.
0.01 8e+0 32 PsAffx.C33000007_at PsAffx.C33000007 - - 1e+0 At4g33467 unknown protein C.G. S.X.
0.01 8e+0 32 PsAffx.C168000037_at PsAffx.C168000037 - - 3e+0 At5g65310 ATHB5 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 5) C.G. S.X.
0.03 8e+0 32 PsAffx.C12000118_s_at PsAffx.C12000118 - - 1e+0 At5g42965 nucleic acid binding / ribonuclease H C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e+0 34 Arabidopsis thaliana At1g53625 841798 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPBOFVA - - - C.G. S.X.
0.03 2e-1 36 Hordeum vulgare Contig20495_at Contig20495 - - 3e-1 At5g15960 KIN1 C.G. S.X.
0.03 1e+1 32 Oryza sativa OsAffx.7280.1.S1_at - - - 0 C.G. S.X.
0.03 5e-1 36 Populus trichocarpa PtpAffx.202690.1.S1_at pmrna5368 hypothetical protein - 9e-1 At3g52390 tatD-related deoxyribonuclease family protein C.G. S.X.
0.04 2e+0 34 Triticum aestivum TaAffx.57805.1.S1_at CA624997 - - 9e-1 At3g11600 unknown protein C.G. S.X.
0.03 4e-1 34 Vitis vinifera 1613387_at CB971364 hypothetical protein LOC100251150 - 1e-25 At5g01460 LMBR1 integral membrane family protein C.G. S.X.
0.02 3e+0 32 Zea mays Zm.5879.1.S1_at CF628626 hypothetical protein LOC100277595 - 5e+0 At5g23220 NIC3 (NICOTINAMIDASE 3) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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