Gene omics information

Query gene ID Gma.7259.2.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6483.4Gma.7259.2.S1_atBQ610944--7e+0At5g45428CPuORF24 (Conserved peptide upstream open reading frame 24)S.X.H.G.
0.6583.8Gma.3820.3.S1_a_atBI968156--3e-3At1g30230elongation factor 1-beta / EF-1-betaS.X.H.G.
0.6583.8GmaAffx.8929.1.S1_atBG551351--1e-24At3g49100signal recognition particle 9 kDa protein, putative / SRP9, putativeS.X.H.G.
0.5678.2GmaAffx.56409.1.S1_atBU965321--1e-16At1g08750GPI-anchor transamidase, putativeS.X.H.G.
0.5374.2Gma.16051.1.S1_atCD398111--6e-25At3g04780-S.X.H.G.
0.5273.1GmaAffx.1729.2.S1_atBG726769--2e-42At4g35410clathrin adaptor complex small chain family proteinS.X.H.G.
0.5273.1GmaAffx.18993.1.S1_atBF597943--2e-60At1g17470ATDRG1 (ARABIDOPSIS THALIANA DEVELOPMENTALLY REGULATED G-PROTEIN 1)S.X.H.G.
0.5071.7Gma.17905.2.S1_atCD393233--8e-37At4g01320ATSTE24S.X.H.G.
0.4968.3Gma.2892.1.S1_atCD398484--3e-36At1g29150ATS9 (ARABIDOPSIS NON-ATPASE SUBUNIT 9)S.X.H.G.
0.4867.7GmaAffx.87924.1.S1_atAW596893--9e-39At3g05000transport protein particle (TRAPP) component Bet3 family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
3.496.4GSM201129Whole Seed at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
3.095.6GSM191092Soybean_Cotyledon_SEED2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stage
2.995.4GSM29331495_1541.1P.R051U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.995.4GSM29350624_2027.2A.R196U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.995.4GSM2938782_3077.2E.SLE1U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.895.1GSM2448622_CON.I5U1.CEL, Experimental replicate 1GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
2.694.5GSM2938407_3061.2D.SLD2L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.694.5GSM29319980_C043.1O.SLO2U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.694.5GSM191091Soybean_Cotyledon_SEED1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stage
2.594.2GSM29343929_1627.1R.R312U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9901842Gma.7259.2.S1_a_atBQ610944--7e+0At5g45428CPuORF24 (Conserved peptide upstream open reading frame 24)C.G.S.X.
0.660985Gma.7259.1.S1_atCD398809--3e-3At3g24160PMP (PUTATIVE TYPE 1 MEMBRANE PROTEIN)C.G.S.X.
0.024e-240GmaAffx.43626.1.A1_atBU544903--4e-1At3g27900unknown proteinC.G.S.X.
0.033e+034PsAffx.psHB003xP06f_s_atPsAffx.psHB003xP06f--3e+0At3g56540serine carboxypeptidase, putativeC.G.S.X.
0.023e+034PsAffx.CL1254Contig1_atPsAffx.CL1254Contig1--5e+0At5g65180-C.G.S.X.
0.023e+034PsAffx.C86000054_atPsAffx.C86000054--9e+0At1g22590MADS-box family proteinC.G.S.X.
0.033e+034PsAffx.C34000090_atPsAffx.C34000090--5e+0At3g05858unknown proteinC.G.S.X.
0.033e+034HgAffx.5374.1.S1_atCD748050--2e-1At5g24879unknown proteinC.G.S.X.
0.023e+034GmaAffx.75909.1.S1_atAW704427--1e-6At3g05100-C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.037e+032Arabidopsis thalianaAt5g454286241150CPuORF24 (Conserved peptide upstream open reading frame 24)Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF24 represents a conserved upstream opening reading frame relative to major ORF AT5G45430.1---C.G.S.X.
0.071e-963Hordeum vulgarerbah59f07_s_atrbah59f07--4e+0At3g24160PMP (PUTATIVE TYPE 1 MEMBRANE PROTEIN)C.G.S.X.
0.041e-242Oryza sativaOs08g0567000AK065186.1-Conserved hypothetical protein3e+0At5g43410ethylene-responsive factor, putativeC.G.S.X.
0.104e-240Populus trichocarpaPtpAffx.54386.1.A1_s_atCV241824hypothetical protein-6e+0Atcg01270-C.G.S.X.
0.052e-963Triticum aestivumTa.9195.1.A1_atBJ287416--2e+0At1g78630emb1473 (embryo defective 1473)C.G.S.X.
0.053e-961Vitis vinifera1611281_atBQ794736hypothetical protein LOC100245241-2e+0At5g50080DNA binding / transcription factorC.G.S.X.
0.028e-134Zea maysZm.17261.1.S1_atCF636612hypothetical protein LOC100192943-2e-18At1g50480THFS (10-FORMYLTETRAHYDROFOLATE SYNTHETASE)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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