Gene omics information

Query gene ID Gma.7210.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.6Gma.7210.1.S1_atBE822041--3e-52At4g11960PGRL1B (PGR5-Like B)S.X.H.G.
0.8091.5Gma.8182.1.S1_a_atCD401769--5e-12At1g65230unknown proteinS.X.H.G.
0.8091.5Gma.2503.1.S1_s_atAF503361.1oxidoreductase /// conversion of hydroxypyruvate to glycerate-6e-94At1g68010HPRS.X.H.G.
0.7187.8Gma.7309.1.S1_atCD396548peroxisomal glycolate oxidase-1e-113At3g14415(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeS.X.H.G.
0.5071.7Gma.2503.1.S1_atAF503361.1oxidoreductase-6e-94At1g68010HPRS.X.H.G.
0.3346.1Gma.7214.1.S1_atCD412786--3e-114At4g37930SHM1 (SERINE TRANSHYDROXYMETHYLTRANSFERASE 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
125.5100.0GSM245934Leaf_Water Control_Rep 2_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
121.5100.0GSM238057Soybean-S03W4-1-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
102.8100.0GSM245933Leaf_Water Control_Rep 1_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
93.3100.0GSM245936Leaf_LCO treated_Rep 1_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
86.2100.0GSM238041Soybean-Bayfield-4-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
79.8100.0GSM238060Soybean-S03W4-4-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
76.7100.0GSM245935Leaf_Water Control_Rep 3_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
72.7100.0GSM245937Leaf_LCO treated_Rep 2_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
62.099.9GSM238061Soybean-S03W4-5-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
61.499.9GSM238030Soybean-2601R-2-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.188e-57222GmaAffx.85302.1.S1_atBF069430--4e-12At4g22890PGR5-LIKE AC.G.S.X.
0.139e-29129GmaAffx.20314.1.A1_atCD392063--6e+0At5g58910LAC16 (laccase 16)C.G.S.X.
0.044e-654Gma.16465.1.A1_atCD416928--4e+0At5g35920CYP79A4PC.G.S.X.
0.012e-138PsAffx.C131000016_atPsAffx.C131000016--2e+0At1g60730aldo/keto reductase family proteinC.G.S.X.
0.022e-138Gma.12681.1.S1_atCD411397--1e-15At5g51720unknown proteinC.G.S.X.
0.021e+036HgAffx.4013.1.A1_atCK348677--4e-1At1g64750ATDSS1(I) (ARABIDOPSIS THALIANA DELETION OF SUV3 SUPRESSOR 1(I))C.G.S.X.
0.001e+036GmaAffx.93647.1.S1_atNC_005097.1--1e+0At1g73550lipid bindingC.G.S.X.
0.021e+036Gma.986.1.S1_atAI959966--2e-6At2g37430zinc finger (C2H2 type) family protein (ZAT11)C.G.S.X.
0.021e+036Gma.16230.1.S1_atCD404236--1e-1At5g23330riboflavin biosynthesis protein-relatedC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.373e-52206Arabidopsis thalianaAt4g11960826803PGRL1B (PGR5-Like B)Encodes PGRL1B, a transmembrane protein present in thylakoids. PGRL1B has a highly homologous isoform PGRL1A encoded by At4g22890. Plants lacking PGRL1 show perturbation of cyclic electron flow, similar to PGR5-deficient plants. PGRL1 and PGR5 interact physically and associate with PSI (photosystem I).---C.G.S.X.
0.156e-1271Hordeum vulgareContig4591_atContig4591--4e-2At4g22890PGR5-LIKE AC.G.S.X.
0.213e-23111Oryza sativaOs08g0526300AK070382.1-Conserved hypothetical protein3e-12At4g11960PGRL1B (PGR5-Like B)C.G.S.X.
0.353e-93343Populus trichocarpaPtpAffx.10960.1.S1_atCV283281hypothetical protein-7e-44At4g11960PGRL1B (PGR5-Like B)C.G.S.X.
0.083e+034Triticum aestivumTa.2742.2.S1_a_atCA619164--7e+0At5g46795MSP2 (microspore-specific promoter 2)C.G.S.X.
0.252e-51202Vitis vinifera1608443_atCF518923hypothetical protein LOC100242824-3e-27At4g11960PGRL1B (PGR5-Like B)C.G.S.X.
0.153e-1375Zea maysZm.12184.1.A1_atBM380021--6e-10At4g11960PGRL1B (PGR5-Like B)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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