CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Gma.6986.2.S1_s_at

Gene name

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.50 71.7 Gma.6986.2.S1_s_at BI972259 - - 7e-16 At1g76150 maoC-like dehydratase domain-containing protein S.X. H.G.
0.50 71.7 Gma.2608.1.S1_at BE058812 - - 1e-9 At4g11740 SAY1 S.X. H.G.
0.47 66.6 Gma.3535.1.S1_s_at CD392670 - - 2e+0 At5g24650 mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein S.X. H.G.
0.44 63.3 Gma.7674.1.A1_at BQ785403 - - 3e-36 At2g20130 LCV1 (LIKE COV 1) S.X. H.G.
0.38 53.3 GmaAffx.57984.1.S1_at AW317447 - - 2e-6 At1g48790 mov34 family protein S.X. H.G.
0.26 33.9 GmaAffx.56354.2.S1_at BI426749 - - 2e-21 At3g03930 protein kinase-related S.X. H.G.
0.25 32.6 GmaAffx.90193.1.S1_s_at CF805918 - - 8e-21 At4g31170 protein kinase family protein S.X. H.G.
0.24 30.9 Gma.8717.1.A1_s_at BU761149 - - 3e-117 At5g46630 clathrin adaptor complexes medium subunit family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.3 97.5 GSM209573 mock_0hours_rep1 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
4.0 97.2 GSM209578 resistant_24hours_rep1 failed QC GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
3.9 97.1 GSM209585 resistant_12hours_rep2 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
3.8 97.0 GSM209595 susceptible_12hours_rep3 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
3.4 96.4 GSM209579 susceptible_24hours_rep1 failed QC GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
3.3 96.2 GSM209586 susceptible_12hours_rep2 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
3.3 96.2 GSM293712 48_2113.2C.R285U, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2 96.0 GSM293676 15_3039.2C.R9C1U, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1 95.8 GSM209594 resistant_12hours_rep3 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
3.1 95.8 GSM209577 susceptible_12hours_rep1 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.98 0 2030 Gma.6986.2.S1_at BI972259 - - 7e-16 At1g76150 maoC-like dehydratase domain-containing protein C.G. S.X.
0.55 0 775 GmaAffx.90484.1.S1_at CF806209 - - 2e-11 At1g76150 maoC-like dehydratase domain-containing protein C.G. S.X.
0.02 8e-1 36 PsAffx.CL58Contig1_s_at PsAffx.CL58Contig1 - - 6e+0 At5g47930 40S ribosomal protein S27 (RPS27D) C.G. S.X.
0.02 8e-1 36 PsAffx.CL650Contig1_at PsAffx.CL650Contig1 - - 1e+0 At2g21780 unknown protein C.G. S.X.
0.02 8e-1 36 PsAffx.CL58Contig1_at PsAffx.CL58Contig1 - - 6e+0 At5g47930 40S ribosomal protein S27 (RPS27D) C.G. S.X.
0.01 8e-1 36 PsAffx.CL15Contig1_at PsAffx.CL15Contig1 - - 1e+0 At1g12890 AP2 domain-containing transcription factor, putative C.G. S.X.
0.03 8e-1 36 HgAffx.24377.1.S1_at BF249490 - - 5e-1 At1g33930 avirulence-responsive family protein / avirulence induced gene (AIG1) family protein C.G. S.X.
0.03 8e-1 36 HgAffx.24282.1.S1_at BF013567 - - 7e+0 At2g19750 40S ribosomal protein S30 (RPS30A) C.G. S.X.
0.03 8e-1 36 HgAffx.23254.1.S1_at BF014595 - - 6e+0 At4g28775 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.18 7e-16 85 Arabidopsis thaliana At1g76150 843947 maoC-like dehydratase domain-containing protein Encodes a monofunctional enoyl-CoA hydratase 2, involved in the degradation of even cis-unsaturated fatty acids, gene expression is enhanced during the first 2 days of germination, as well as in senescent leaves. - - - C.G. S.X.
0.02 3e-1 36 Hordeum vulgare HT11C04u_x_at HT11C04u - - 4e+0 At1g56010 NAC1 C.G. S.X.
0.02 4e+0 34 Oryza sativa OsAffx.31486.1.S1_at - - - 0 C.G. S.X.
0.40 1e-64 248 Populus trichocarpa Ptp.4396.1.S1_s_at CK091251 hypothetical protein - 3e-12 At1g76150 maoC-like dehydratase domain-containing protein C.G. S.X.
0.03 4e-2 40 Triticum aestivum TaAffx.9095.1.S1_at CA612646 - - 2e-1 At5g19370 rhodanese-like domain-containing protein / PPIC-type PPIASE domain-containing protein C.G. S.X.
0.23 2e-35 149 Vitis vinifera 1608601_at BQ800518 hypothetical protein LOC100262653 - 6e-20 At1g76150 maoC-like dehydratase domain-containing protein C.G. S.X.
0.03 2e-8 59 Zea mays Zm.5870.1.S1_at BF729179 hypothetical protein LOC100272552 - 1e+0 At3g26147 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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