Gene omics information

Query gene ID Gma.6940.1.A1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.6Gma.6940.1.A1_atCA784222--5e+0At2g39320OTU-like cysteine protease family proteinS.X.H.G.
0.8091.5Gma.5276.1.S1_atBM731770--8e-36At4g13430IIL1 (ISOPROPYL MALATE ISOMERASE LARGE SUBUNIT 1)S.X.H.G.
0.6786.1Gma.4917.1.S1_atBI969807--6e-20At1g04940TIC20 (TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 20)S.X.H.G.
0.6181.8Gma.16456.1.A1_atBE823704--2e-4At3g28970AAR3 (antiauxin-resistant 3)S.X.H.G.
0.6080.7GmaAffx.81837.1.S1_atCD410469--5e-81At4g17040ATP-dependent Clp protease proteolytic subunit, putativeS.X.H.G.
0.4057.1Gma.16782.1.S1_atCD412337--2e-41At1g29880glycyl-tRNA synthetase / glycine--tRNA ligaseS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
21.999.8GSM238034Soybean-2601R-6-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
17.099.7GSM245938Leaf_LCO treated_Rep 3_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
16.999.7GSM238048Soybean-Mandarin-3-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
16.799.7GSM238052Soybean-PS46R-1-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
15.499.6GSM238030Soybean-2601R-2-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
14.899.6GSM245935Leaf_Water Control_Rep 3_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
14.899.6GSM245937Leaf_LCO treated_Rep 2_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
13.999.6GSM238049Soybean-Mandarin-4-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
13.899.5GSM238043Soybean-Bayfield-5-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
12.599.5GSM209589resistant_48hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.005e-136PsAffx.C7000228_atPsAffx.C7000228--4e-1At5g22680-C.G.S.X.
0.035e-136GmaAffx.33485.1.A1_atBU551341--4e+0At2g34123-C.G.S.X.
0.035e-136Gma.5671.2.S1_atAW706946--8e-6At2g31740methyltransferaseC.G.S.X.
0.012e+034PsAffx.C98000006_atPsAffx.C98000006--7e-3At4g38590glycosyl hydrolase family 35 proteinC.G.S.X.
0.012e+034PsAffx.C63000060_atPsAffx.C63000060--2e-2At1g21910AP2 domain-containing transcription factor family proteinC.G.S.X.
0.022e+034PsAffx.C59000041_atPsAffx.C59000041--5e-1At1g20140ASK4 (ARABIDOPSIS SKP1-LIKE 4)C.G.S.X.
0.022e+034PsAffx.C242000004_atPsAffx.C242000004--2e+0At4g02360unknown proteinC.G.S.X.
0.032e+034HgAffx.5117.1.S1_atCD748307--1e+0At4g01480AtPPa5 (Arabidopsis thaliana pyrophosphorylase 5)C.G.S.X.
0.032e+034HgAffx.15379.1.S1_atCB281615--3e+0At3g11490rac GTPase activating protein, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.035e+032Arabidopsis thalianaAt2g39320818517OTU-like cysteine protease family proteinF:cysteine-type peptidase activity;P:biological_process unknown;C:cellular_component unknown;MOFBPVA---C.G.S.X.
0.054e-238Hordeum vulgareContig9136_atContig9136--1e-5At3g51140-C.G.S.X.
0.053e-344Oryza sativaOs03g0255200AK071625.1--1e-2At3g51140-C.G.S.X.
0.262e-1583Populus trichocarpaPtpAffx.207400.1.S1_atpmrna14687hypothetical protein-9e-17At3g51140-C.G.S.X.
0.041e+034Triticum aestivumTa.7946.1.A1_atBQ161000--4e+0At5g397905'-AMP-activated protein kinase beta-1 subunit-relatedC.G.S.X.
0.062e+032Vitis vinifera1617601_atCF208695similar to heat shock protein binding-1e-12At3g51140-C.G.S.X.
0.032e+032Zea maysZmAffx.126.1.A1_atAI665940--3e+0At5g14910heavy-metal-associated domain-containing proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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