Gene omics information

Query gene ID	Gma.6708.1.A1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.94	99.2	Gma.6708.1.A1_at	BQ610551	-	-	3e-4	At1g67890	protein kinase family protein	S.X.	H.G.	Please select
0.61	81.8	Gma.2520.1.S1_at	AW570245	-	-	2e-7	At2g46500	phosphatidylinositol 3- and 4-kinase family protein / ubiquitin family protein	S.X.	H.G.	Please select
0.58	78.8	Gma.2301.1.S1_at	BE820698	-	-	1e-10	At4g25870	unknown protein	S.X.	H.G.	Please select
0.57	78.8	Gma.8705.1.S1_at	BQ742642	-	-	1e-23	At1g65430	zinc finger protein-related	S.X.	H.G.	Please select
0.55	76.3	Gma.6902.1.S1_a_at	CD396278	-	-	1e-12	At5g01010	-	S.X.	H.G.	Please select
0.44	63.3	Gma.17071.1.S1_at	BE822434	-	-	6e-2	At1g43890	ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18)	S.X.	H.G.	Please select
0.44	63.3	Gma.2300.2.S1_at	BM887591	-	-	1e-18	At3g52850	VSR1 (VACUOLAR SORTING RECEPTOR HOMOLOG 1)	S.X.	H.G.	Please select
0.41	58.1	Gma.17485.2.S1_a_at	AI759830	-	-	9e-3	At2g33490	hydroxyproline-rich glycoprotein family protein	S.X.	H.G.	Please select
0.39	54.5	Gma.2460.1.S1_at	AW349530	-	-	2e-49	At4g39910	ATUBP3 (ARABIDOPSIS THALIANA UBIQUITIN-SPECIFIC PROTEASE 3)	S.X.	H.G.	Please select
0.38	53.3	Gma.3083.1.S1_at	BE474466	-	-	3e-65	At4g33430	BAK1 (BRI1-ASSOCIATED RECEPTOR KINASE)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.8	97.0	GSM293763	9_3039.2C.R9C1L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.7	96.8	GSM294007	5_3095.2F.R9F1U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM294052	10_3117.2G.R9G2U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM293113	28_C047.1O.R9O2L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM293676	15_3039.2C.R9C1U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM292383	58_C099.1F.V7F2U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM293112	27_C047.1O.R9O2U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM293294	77_C067.1P.R9P3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM294383	42_2451.2J.R290L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM293938	84_3083.2E.R9E2L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.09	2e-22	107	GmaAffx.83003.1.S1_at	BU545212	-	-	2e-68	At5g49470	protein kinase family protein	C.G.	S.X.	Please select
0.03	1e-1	38	GmaAffx.68849.1.S1_at	BU089791	-	-	4e-28	At5g11850	protein kinase family protein	C.G.	S.X.	Please select
0.01	5e-1	36	PsAffx.C95000057_at	PsAffx.C95000057	-	-	3e-1	At1g56080	unknown protein	C.G.	S.X.	Please select
0.01	5e-1	36	PsAffx.C105000047_at	PsAffx.C105000047	-	-	1e+0	At1g33810	unknown protein	C.G.	S.X.	Please select
0.01	2e+0	34	PsAffx.C46000052_at	PsAffx.C46000052	-	-	2e+0	At4g14580	CIPK4 (CBL-interacting protein kinase 4)	C.G.	S.X.	Please select
0.01	2e+0	34	PsAffx.C391000002_at	PsAffx.C391000002	-	-	3e+0	At4g23880	unknown protein	C.G.	S.X.	Please select
0.03	2e+0	34	GmaAffx.87595.1.S1_at	BI786102	-	-	9e-1	At1g13690	ATE1	C.G.	S.X.	Please select
0.02	2e+0	34	GmaAffx.839.1.S1_at	BQ741152	-	-	9e-15	At5g42870	lipin family protein	C.G.	S.X.	Please select
0.03	2e+0	34	GmaAffx.64006.1.S1_at	AI988156	-	-	1e+0	At4g28530	anac074 (Arabidopsis NAC domain containing protein 74)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	3e-4	46	Arabidopsis thaliana	At1g67890	843117	protein kinase family protein	F:protein serine/threonine/tyrosine kinase activity, kinase activity;P:signal transduction, protein amino acid phosphorylation, regulation of transcription, DNA-dependent;C:unknown;MPOBFVA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	3e+0	32	Hordeum vulgare	Contig26594_at	Contig26594	-	-	9e-1	At5g44565	unknown protein	C.G.	S.X.	Please select
0.03	2e-4	48	Oryza sativa	Os11g0141400	AK070778.1	-	Calcium-binding EF-hand domain containing protein	2e-3	At5g62500	ATEB1B (END BINDING PROTEIN 1B)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.09	3e-14	79	Populus trichocarpa	PtpAffx.209072.1.S1_at	pmrna17945	hypothetical protein	-	6e-64	At1g67890	protein kinase family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	5e+0	32	Triticum aestivum	TaAffx.6686.1.S1_at	CA680146	-	-	2e+0	At5g13510	ribosomal protein L10 family protein	C.G.	S.X.	Please select
0.03	2e+0	32	Vitis vinifera	1609391_s_at	CF404650	hypothetical protein LOC100243780	-	3e+0	At5g09380	DNA-directed RNA polymerase III RPC4 family protein	C.G.	S.X.	Please select
0.03	6e-1	34	Zea mays	Zm.6422.1.A1_at	AY108637.1	INDETERMINATE-related protein 1	-	5e+0	At3g11280	myb family transcription factor	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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