Gene omics information

Query gene ID Gma.6696.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8793.2Gma.6696.1.S1_atBI970794--2e-36At5g23300PYRD (pyrimidine d)S.X.H.G.
0.6080.7Gma.4208.2.S1_x_atCD401340--2e-34At1g22780PFL (POINTED FIRST LEAVES)S.X.H.G.
0.5878.8Gma.2819.1.S1_atBE821662--5e-33At1g72550tRNA synthetase beta subunit family proteinS.X.H.G.
0.5678.2Gma.13041.1.S1_atCD396718--2e-1At1g02440ATARFD1A (ADP-ribosylation factor D1A)S.X.H.G.
0.5576.3Gma.10782.1.S1_s_atCD410674--0At1g56070LOS1S.X.H.G.
0.5474.8Gma.4290.1.S1_atAF420435.1ABC transporter-like protein-2e-101At1g64550ATGCN3S.X.H.G.
0.5071.7GmaAffx.89191.1.A1_atCK606438--1e-20At3g0852060S ribosomal protein L41 (RPL41D)S.X.H.G.
0.5071.7Gma.4208.2.S1_atCD401340--2e-34At1g22780PFL (POINTED FIRST LEAVES)S.X.H.G.
0.4766.6Gma.317.1.S1_s_atCD416707--3e-49At2g4184040S ribosomal protein S2 (RPS2C)S.X.H.G.
0.4563.9Gma.8060.1.S1_atBG725572--1e-10At1g51710UBP6 (UBIQUITIN-SPECIFIC PROTEASE 6)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
5.298.1GSM267287Axillary meristem from 10-day-old soybean seedlings GSE10607Genome-wide analysis of gene expression in the soybean shoot apical meristem
4.998.0GSM29292395_1465.1L.R283L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.297.4GSM309530storage protein suppression expt, RNAi biol rep2, tech rep1GSE12314Storage Protein Suppression in Transgenic Soybean Cotyledons
4.197.3GSM309529storage protein suppression expt, RNAi biol rep1, tech rep1GSE12314Storage Protein Suppression in Transgenic Soybean Cotyledons
4.197.3GSM24485628_V71.I1W2.CEL, Experimental replicate 2GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
4.097.2GSM258496Vegetative soybean shoot apical meristemGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
3.897.0GSM201097Laser capture microdissected (LCM) axis epidermis at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
3.796.8GSM309557storage protein suppression expt, RNAi biol rep1, tech rep2GSE12314Storage Protein Suppression in Transgenic Soybean Cotyledons
3.596.6GSM29360131_2069.2B.R213L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.596.6GSM24481018_SLO.I1W1.CEL, Experimental replicate 1GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.012e+034PsAffx.C47000026_atPsAffx.C47000026--2e+0At1g32975unknown proteinC.G.S.X.
0.012e+034PsAffx.C250000003_atPsAffx.C250000003--3e+0At5g05830zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.012e+034PsAffx.C223000010_atPsAffx.C223000010--3e+0At2g40935unknown proteinC.G.S.X.
0.012e+034PsAffx.C177000020_atPsAffx.C177000020--2e-3At3g01080WRKY58C.G.S.X.
0.032e+034GmaAffx.91916.1.S1_atCF807641--6e-27At4g22220ISU1C.G.S.X.
0.032e+034GmaAffx.3541.2.S1_atBM567757--8e-1At2g37990ribosome biogenesis regulatory protein (RRS1) family proteinC.G.S.X.
0.032e+034GmaAffx.3541.2.S1_s_atBM567757--8e-1At2g37990ribosome biogenesis regulatory protein (RRS1) family proteinC.G.S.X.
0.022e+034Gma.6833.1.S1_atBU545297--9e-12At5g11710epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-relatedC.G.S.X.
0.022e+034Gma.6645.1.S1_atBQ629174--1e-1At1g59865unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.332e-36153Arabidopsis thalianaAt5g23300832394PYRD (pyrimidine d)dihydroorotate dehydrogenase, catalyses fourth step of pyrimidine biosynthesis---C.G.S.X.
0.072e-446Hordeum vulgareContig17672_atContig17672--2e-16At5g23300PYRD (pyrimidine d)C.G.S.X.
0.186e-1789Oryza sativaOs04g06763009632.m05660-Dihydroorotate dehydrogenase, mitochondrialprecursor (EC 1.3.3.1) (Dihydroorotate oxidase)(DHOdehase)4e-21At5g23300PYRD (pyrimidine d)C.G.S.X.
0.514e-54212Populus trichocarpaPtpAffx.75330.1.A1_s_atCV273977hypothetical protein-1e-35At5g23300PYRD (pyrimidine d)C.G.S.X.
0.103e-550Triticum aestivumTaAffx.99087.1.S1_atCA719152--2e-13At5g23300PYRD (pyrimidine d)C.G.S.X.
0.261e-38159Vitis vinifera1617318_atCF209178hypothetical protein LOC100258316-4e-12At5g23300PYRD (pyrimidine d)C.G.S.X.
0.031e+130Zea maysZmAffx.1201.1.A1_atBE128817--8e-1At2g18970unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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