Gene omics information

Query gene ID Gma.6549.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8693.0Gma.6549.1.S1_atBM139635--3e-1At2g19990PR-1-LIKE (PATHOGENESIS-RELATED PROTEIN-1-LIKE)S.X.H.G.
0.4463.3GmaAffx.11889.1.S1_atBE657528--9e-1At5g63150unknown proteinS.X.H.G.
0.4057.1Gma.6267.1.S1_atCD403650--3e-2At5g62940Dof-type zinc finger domain-containing proteinS.X.H.G.
0.3650.8GmaAffx.12649.1.S1_s_atAW309146--3e-10At4g24780pectate lyase family proteinS.X.H.G.
0.3650.8GmaAffx.13717.1.S1_atBI316021--2e-63At5g63180pectate lyase family proteinS.X.H.G.
0.3142.2Gma.6481.1.S1_atCD416703--2e-2At3g08770LTP6S.X.H.G.
0.2735.7Gma.15925.1.S1_atBG237519--7e-5At4g25780pathogenesis-related protein, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
11.899.4GSM29323927_C063.1P.V7P2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
11.499.4GSM29350826_2015.2A.R250U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
11.199.4GSM29358416_2089.2B.R181U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.399.3GSM29330688_C055.1P.V7P1U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.399.3GSM29413589_2319.2G.R131L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.899.3GSM2932533_C063.1P.V7P2U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.599.2GSM29452082_2495.2K.R187L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.799.1GSM29470367_2585.2M.R160L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.599.1GSM29367918_3047.2C.V7C2U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.499.1GSM29354257_3011.2A.V7A2U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.044e-756GmaAffx.49788.1.S1_atBG154410--3e-8At1g19340methyltransferase MT-A70 family proteinC.G.S.X.
0.052e-654GmaAffx.8039.1.S1_atBF068090--1e+0At1g78790unknown proteinC.G.S.X.
0.052e-654GmaAffx.68124.1.S1_atBG510658--3e-1At2g07835unknown proteinC.G.S.X.
0.062e-654GmaAffx.5376.4.S1_atCD414276--2e-7At5g4643060S ribosomal protein L32 (RPL32B)C.G.S.X.
0.062e-654GmaAffx.43220.1.A1_atCD415089--3e+0At5g38140NF-YC12 (NUCLEAR FACTOR Y, SUBUNIT C12)C.G.S.X.
0.062e-654GmaAffx.41862.1.S1_atBM523478--5e-1At4g34990AtMYB32 (myb domain protein 32)C.G.S.X.
0.062e-654GmaAffx.34039.1.A1_atCD408864--7e-1At4g08640ATP binding / protein bindingC.G.S.X.
0.042e-654GmaAffx.1504.2.A1_s_atCD397017--5e+0At1g77910unknown proteinC.G.S.X.
0.052e-654GmaAffx.14913.1.S1_atBQ612102--8e-1At3g62050-C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.103e-136Arabidopsis thalianaAt2g19990816518PR-1-LIKE (PATHOGENESIS-RELATED PROTEIN-1-LIKE)Encodes a PR-1-like protein homolog that is differentially expressed in resistant compared to susceptible cultivars by powdery mildew infection. The deduced amino acid sequence has 24 amino acids comprising the signal peptide and 140 amino acids of the mature peptide (15 kDa). Northern blot analysis showed accumulation of the corresponding mRNA 12 h after inoculation of resistant barley cultivars with Erysiphe graminis. Though the Genbank record for the cDNA associated to this gene model is called 'PR-1', the sequence actually corresponds to PR-1-like. Expression of this gene is not salicylic-acid responsive.---C.G.S.X.
0.072e-652Hordeum vulgareContig2082_x_atContig2082--9e-1At1g72416heat shock protein bindingC.G.S.X.
0.042e-344Oryza sativaOs05g0202800AF009959.1-Plant metallothionein, family 15 protein3e-7At3g15353MT3 (METALLOTHIONEIN 3)C.G.S.X.
0.042e-654Populus trichocarpaPtpAffx.114096.2.A1_a_atCV257943--6e+0At4g01995unknown proteinC.G.S.X.
0.051e-654Triticum aestivumTa.22143.1.S1_atCA725173--3e+0At3g53220thioredoxin family proteinC.G.S.X.
0.042e-548Vitis vinifera1617182_atCB921793--5e-3At1g62240unknown proteinC.G.S.X.
0.038e-650Zea maysZm.13443.1.A1_atU08225.1Histone H2A-4e-11At5g02560HTA12C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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