CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Gma.6414.1.S1_at

Gene name

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.61 81.8 Gma.6414.1.S1_at BE659785 - - 5e-3 At5g57770 - S.X. H.G.
0.67 86.1 Gma.374.2.S1_at AI494929 - - 1e+0 At2g47140 short-chain dehydrogenase/reductase (SDR) family protein S.X. H.G.
0.55 76.3 GmaAffx.84632.1.S1_at AW119808 - - 7e-8 At5g57770 - S.X. H.G.
0.50 71.7 Gma.374.1.A1_at AW309650 - - 1e-3 At3g29250 copper ion binding / oxidoreductase S.X. H.G.
0.44 63.3 Gma.6494.1.S1_at BI784551 - - 3e-41 At2g12646 - S.X. H.G.
0.35 48.6 Gma.405.1.A1_at AI443411 - - 3e-3 At5g12940 leucine-rich repeat family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
10.6 99.3 GSM292984 60_1510.1M.R307P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.6 99.3 GSM292580 10_1331.1I.R208L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.9 99.3 GSM292746 10_1426.1K.R262P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.6 99.2 GSM294707 70_2600.2M.R182P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.4 99.2 GSM294431 86_2456.2J.R220P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.3 99.2 GSM292729 74_1382.1J.R238P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.8 99.1 GSM293861 14_2240.2E.R257P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.7 99.1 GSM293790 34_2150.2D.R295P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.6 99.1 GSM294583 52_2568.2L.R219P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.2 99.0 GSM293299 81_1225.1P.R138L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e+0 34 Gma.3917.1.S1_at BE658782 - - 4e-6 At4g19420 pectinacetylesterase family protein C.G. S.X.
0.02 6e+0 32 PsAffx.C81000024_at PsAffx.C81000024 - - 1e-1 At2g01755 unknown protein C.G. S.X.
0.01 6e+0 32 PsAffx.C356000004_at PsAffx.C356000004 - - 1e+0 At1g06050 unknown protein C.G. S.X.
0.03 6e+0 32 HgAffx.19809.2.S1_at CA939371 - - 9e-7 At5g08290 YLS8 C.G. S.X.
0.02 6e+0 32 Gma.8378.1.S1_at BI969004 - - 1e-17 At4g14360 dehydration-responsive protein-related C.G. S.X.
0.02 6e+0 32 Gma.13283.1.S1_at CD400326 - - 3e-2 At3g23760 - C.G. S.X.
0.02 6e+0 32 Gma.13211.1.A1_at BU550963 - - 4e-1 At5g20736 unknown protein C.G. S.X.
0.01 2e+1 30 PsAffx.C99000057_at PsAffx.C99000057 - - 2e+0 At5g04490 VTE5 (vitamin E pathway gene5) C.G. S.X.
0.02 2e+1 30 PsAffx.C81000021_at PsAffx.C81000021 - - 2e+0 At2g23290 AtMYB70 (myb domain protein 70) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 5e-3 42 Arabidopsis thaliana At5g57770 835885 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PB - - - C.G. S.X.
0.04 9e+0 30 Hordeum vulgare rbags24b14_at rbags24b14 - - 2e+1 At5g63063 - C.G. S.X.
0.03 2e+0 34 Oryza sativa Os08g0195000 9636.m00913 - - 6e+0 At5g60850 OBP4 C.G. S.X.
0.23 2e-15 83 Populus trichocarpa PtpAffx.19965.1.A1_s_at CK096680 hypothetical protein - 3e-5 At5g57770 - C.G. S.X.
0.03 2e+1 30 Triticum aestivum TaAffx.22700.1.S1_at CA746347 - - 9e+0 At4g05050 UBQ11 (UBIQUITIN 11) C.G. S.X.
0.03 1e+0 32 Vitis vinifera 1617272_at CF518232 zinc finger RING-type protein-like - 1e-3 At3g54780 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.03 8e+0 30 Zea mays Zm.18648.1.A1_at CO521265 plant-specific domain TIGR01589 family protein - 6e-3 At1g11690 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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