Gene omics information

Query gene ID Gma.6399.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6786.1Gma.6399.1.S1_atBI701478--9e-1At5g59030COPT1 (copper transporter 1)S.X.H.G.
0.9298.9Gma.6081.1.S1_atBI967474--5e-5At1g05850POM1 (POM-POM1)S.X.H.G.
0.9093.7Gma.1188.1.A1_atAW310201--1e-10At1g13635methyladenine glycosylase family proteinS.X.H.G.
0.8893.4Gma.9086.1.S1_atAW184932--6e-10At4g18780IRX1 (IRREGULAR XYLEM 1)S.X.H.G.
0.8893.4GmaAffx.55959.1.S1_atBQ629429--5e-31At5g54690GAUT12 (GALACTURONOSYLTRANSFERASE 12)S.X.H.G.
0.8793.2Gma.18052.1.S1_atBF595464--4e-23At1g06890transporter-relatedS.X.H.G.
0.8592.8Gma.15113.1.S1_a_atAI973546--4e-1At5g15290integral membrane family proteinS.X.H.G.
0.8492.6Gma.6331.1.S1_atBQ612445--2e-44At5g44030CESA4 (CELLULOSE SYNTHASE A4)S.X.H.G.
0.8492.6GmaAffx.3712.1.S1_atAW307307--7e-55At5g17420IRX3 (IRREGULAR XYLEM 3)S.X.H.G.
0.8392.5Gma.9086.2.S1_atBE555169--5e-34At4g18780IRX1 (IRREGULAR XYLEM 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
23.699.8GSM2922455_C027.1B.V7B2U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
15.299.6GSM29420658_2338.2H.R240P_new, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
12.199.5GSM29321595_C050.1O.SLO3P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
11.599.4GSM29227217_C082.1E.SLE2P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
11.299.4GSM29222115_C026.1B.SLB2P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
11.099.4GSM29230148_1168.1E.R104P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.299.3GSM29461884_3204.2L.SLL1P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.199.3GSM29226180_C027.1B.V7B2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.099.3GSM29292698_C204.1L.SLL1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.799.3GSM29312740_1148.1O.R093P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e-136PsAffx.C37000046_s_atPsAffx.C37000046--2e+0At5g62880ARAC10C.G.S.X.
0.043e-136GmaAffx.50320.1.S1_atBI425390--2e-1At1g56415Expressed proteinC.G.S.X.
0.043e-136GmaAffx.49253.1.S1_atBM086167--1e-21At2g40940ERS1 (ETHYLENE RESPONSE SENSOR 1)C.G.S.X.
0.011e+034PsAffx.C287000003_atPsAffx.C287000003--4e-2At1g22110structural constituent of ribosomeC.G.S.X.
0.021e+034PsAffx.C173000013_atPsAffx.C173000013--2e+0At4g37140MEE69 (MATERNAL EFFECT EMBRYO ARREST 69)C.G.S.X.
0.021e+034PsAffx.C164000023_atPsAffx.C164000023--1e-1At3g23290-C.G.S.X.
0.031e+034HgAffx.3958.1.S1_atCK348732--5e+0At4g00580COP1-interacting protein-relatedC.G.S.X.
0.041e+034HgAffx.16319.1.S1_atCB375459--6e-2At5g3974060S ribosomal protein L5 (RPL5B)C.G.S.X.
0.025e+032PsAffx.CL86Contig2_atPsAffx.CL86Contig2--8e+0At5g38020S-adenosyl-L-methionine:carboxyl methyltransferase family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.059e-134Arabidopsis thalianaAt5g59030836020COPT1 (copper transporter 1)encodes a putative copper transport protein that contains copper-binding motif and functionally complements in copper-transport defective yeast strains---C.G.S.X.
0.037e+030Hordeum vulgareHA09l22r_atHA09l22r--7e-1At5g26720unknown proteinC.G.S.X.
0.045e-136Oryza sativaOs06g0141700AK121791.1-Early nodulin (ESTs C98096(C0688))3e-1At5g12300C2 domain-containing proteinC.G.S.X.
0.035e+032Populus trichocarpaPtpAffx.87526.1.S1_atBU893569--2e-2At4g23130CRK5 (CYSTEINE-RICH RLK5)C.G.S.X.
0.041e+034Triticum aestivumTaAffx.37395.1.S1_atBJ281577--3e-1At4g32490plastocyanin-like domain-containing proteinC.G.S.X.
0.031e+032Vitis vinifera1621270_atCB971990hypothetical protein LOC100252531-4e-4At5g11590TINY2 (TINY2)C.G.S.X.
0.026e+030Zea maysZm.9464.1.A1_atCF972371hypothetical protein LOC100272725-1e-1At4g14385-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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