Gene omics information

Query gene ID	Gma.6196.2.S1_a_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.83	92.5	Gma.6196.2.S1_a_at	BI972744	-	-	2e-35	At2g14120	dynamin-like protein 2b (ADL2b)	S.X.	H.G.	Please select
0.56	78.2	GmaAffx.85638.1.S1_at	BF425777	-	-	4e-13	At5g55000	FIP2	S.X.	H.G.	Please select
0.56	78.2	Gma.12030.3.S1_a_at	BG359479	-	-	4e+0	At3g47341	unknown protein	S.X.	H.G.	Please select
0.56	78.2	Gma.12593.3.S1_at	AW756323	-	-	5e-34	At2g32170	-	S.X.	H.G.	Please select
0.48	67.7	GmaAffx.55210.2.S1_at	BE330623	-	-	3e-32	At2g43070	protease-associated (PA) domain-containing protein	S.X.	H.G.	Please select
0.48	67.7	GmaAffx.33620.2.S1_at	BM731339	-	-	2e-14	At1g51730	RWD domain-containing protein	S.X.	H.G.	Please select
0.47	66.6	GmaAffx.89144.1.A1_s_at	CK605580	-	-	2e-21	At3g60600	VAP (VESICLE ASSOCIATED PROTEIN)	S.X.	H.G.	Please select
0.47	66.6	GmaAffx.92769.1.S1_s_at	CF808494	-	-	1e-75	At3g19760	eukaryotic translation initiation factor 4A, putative / eIF-4A, putative / DEAD box RNA helicase, putative	S.X.	H.G.	Please select
0.43	60.6	GmaAffx.45366.1.S1_at	BG507323	-	-	3e+0	At5g22180	unknown protein	S.X.	H.G.	Please select
0.41	58.1	Gma.11201.3.S1_a_at	BG239638	-	-	5e-12	At4g36760	ATAPP1	S.X.	H.G.	Please select

Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
5.3	98.2	GSM292208	70_C004.1A.R9A1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.0	98.0	GSM294197	4_3138.2H.R9H2P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.0	98.0	GSM292258	78_C034.1B.R9B3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.0	98.0	GSM293419	10_C108.1R.R9R3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.9	98.0	GSM292195	57_1024.1A.R013P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.9	98.0	GSM294219	6_2368.2H.R229P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.7	97.8	GSM294341	89_2432.2I.R296P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.7	97.8	GSM293998	51_3092.2F.SLF1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.7	97.8	GSM293911	5_2236.2E.R249P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.7	97.8	GSM294514	77_2502.2K.R025P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
1.00	0	2704	Gma.6196.2.S1_at	BI972744	-	-	2e-35	At2g14120	dynamin-like protein 2b (ADL2b)	C.G.	S.X.	Please select
0.31	2e-75	284	Gma.7901.1.S1_at	BU550953	-	-	2e-19	At4g33650	DRP3A (DYNAMIN-RELATED PROTEIN 3A)	C.G.	S.X.	Please select
0.08	4e-49	196	Gma.6196.1.S1_at	BE058075	-	-	2e+0	At5g39720	AIG2L (AVIRULENCE INDUCED GENE 2 LIKE PROTEIN)	C.G.	S.X.	Please select
0.09	7e-14	79	Gma.16298.1.A1_at	AW348226	-	-	2e-9	At4g33650	DRP3A (DYNAMIN-RELATED PROTEIN 3A)	C.G.	S.X.	Please select
0.02	2e-1	38	Gma.15701.1.A1_at	CD399999	-	-	8e-8	At5g38290	peptidyl-tRNA hydrolase family protein	C.G.	S.X.	Please select
0.01	1e+0	36	PsAffx.C40000020_at	PsAffx.C40000020	-	-	9e-1	At5g51545	LPA2 (low psii accumulation2)	C.G.	S.X.	Please select
0.02	1e+0	36	Gma.9493.1.S1_at	CA820384	-	-	3e-4	At3g21640	TWD1 (TWISTED DWARF 1)	C.G.	S.X.	Please select
0.02	1e+0	36	Gma.13198.1.S1_at	CD391115	-	-	5e-16	At3g09010	protein kinase family protein	C.G.	S.X.	Please select
0.01	4e+0	34	PsAffx.C56000027_at	PsAffx.C56000027	-	-	2e+0	At4g38040	exostosin family protein	C.G.	S.X.	Please select

Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.26	2e-35	151	Arabidopsis thaliana	At2g14120	815898	dynamin-like protein 2b (ADL2b)	Encodes a dynamin related protein. DRPs are self-assembling GTPasse involved in fission and fusion of membranes. DRP3B functions in mitochondrion and peroxisome fission in combination with DRP3A.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.14	1e-16	87	Hordeum vulgare	Contig10920_at	Contig10920	-	-	3e-13	At4g33650	DRP3A (DYNAMIN-RELATED PROTEIN 3A)	C.G.	S.X.	Please select
0.09	4e-4	48	Oryza sativa	Os04g0381000	AK105435.1	-	Dynamin-like protein	2e-11	At4g33650	DRP3A (DYNAMIN-RELATED PROTEIN 3A)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.18	3e-22	107	Populus trichocarpa	PtpAffx.6409.1.S1_at	CK090501	hypothetical protein	-	7e-28	At4g33650	DRP3A (DYNAMIN-RELATED PROTEIN 3A)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.08	5e-2	40	Triticum aestivum	Ta.26919.2.S1_a_at	CA600750	-	-	1e+0	At4g33650	DRP3A (DYNAMIN-RELATED PROTEIN 3A)	C.G.	S.X.	Please select
0.02	8e-1	34	Vitis vinifera	1615239_at	CF511089	-	-	4e-3	At5g45620	26S proteasome regulatory subunit, putative (RPN9)	C.G.	S.X.	Please select
0.03	8e-2	38	Zea mays	Zm.18527.1.A1_at	CF630266	-	-	9e-1	At3g25110	AtFaTA (Arabidopsis FatA acyl-ACP thioesterase)	C.G.	S.X.	Please select

Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage