Gene omics information

Query gene ID Gma.5964.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7890.6Gma.5964.1.S1_atAW348696--3e-62At3g13235ubiquitin family proteinS.X.H.G.
0.6382.9Gma.8209.1.S1_atBU546771--2e-47At5g58100unknown proteinS.X.H.G.
0.6382.9Gma.11232.1.S1_s_atBI943460--0At5g19990RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A)S.X.H.G.
0.6080.7Gma.4214.1.S1_atCD418435mitogen-activated protein kinase 2-5e-70At2g43790ATMPK6 (ARABIDOPSIS THALIANA MAP KINASE 6)S.X.H.G.
0.6080.7Gma.5581.1.S1_atCD392224--8e-53At3g27430PBB1S.X.H.G.
0.6080.7Gma.3626.2.S1_x_atBQ612673--2e-60At3g59920ATGDI2 (RAB GDP DISSOCIATION INHIBITOR 2)S.X.H.G.
0.5678.2Gma.11256.1.S1_atCD401123--7e-28At1g56450PBG1S.X.H.G.
0.4766.6Gma.17905.2.S1_atCD393233--8e-37At4g01320ATSTE24S.X.H.G.
0.4463.3GmaAffx.56409.1.S1_atBU965321--1e-16At1g08750GPI-anchor transamidase, putativeS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
3.195.8GSM29217834-1006.1A.R003P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.895.1GSM29359526_2077.2B.R246U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.794.8GSM29332414_C074.1Q.V7Q1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.794.8GSM2933412_1571.1Q.R159L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.594.2GSM29334634_1550.1Q.R078P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.493.8GSM29358920_2073.2B.R308L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.493.8GSM29331091_1180.1P.R110P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.393.3GSM29330789_1202.1P.R124P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.393.3GSM2931152_C049.1O.SLO3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.393.3GSM29360131_2069.2B.R213L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.011e+036PsAffx.C13000004_atPsAffx.C13000004--2e+0At1g20130hydrolase, acting on ester bonds / lipase/ structural constituent of cell wallC.G.S.X.
0.011e+036HgAffx.85.1.S1_atAF095746.2--2e+0At3g22010receptor-like protein kinase-relatedC.G.S.X.
0.011e+036HgAffx.83.1.S1_atAF283665.1--1e-1At2g31360ADS2 (16:0Delta9 Arabidopsis desaturase 2)C.G.S.X.
0.021e+036HgAffx.10771.1.S1_atCB378209--4e-1At3g06230ATMKK8C.G.S.X.
0.021e+036GmaAffx.35519.1.S1_atCA801657--5e+0At5g36130cytochrome P450 familyC.G.S.X.
0.014e+034PsAffx.C50000005_atPsAffx.C50000005--8e-1At2g28305unknown proteinC.G.S.X.
0.014e+034PsAffx.C42000081_atPsAffx.C42000081--3e+0At5g24660LSU2 (RESPONSE TO LOW SULFUR 2)C.G.S.X.
0.014e+034PsAffx.C3000198_atPsAffx.C3000198--1e-1At3g57360unknown proteinC.G.S.X.
0.014e+034PsAffx.C282000011_atPsAffx.C282000011--3e+0Atmg01290-C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.423e-62240Arabidopsis thalianaAt3g13235820522ubiquitin family proteinF:aspartic-type endopeptidase activity;P:response to cadmium ion;C:cytosol, nucleus;MPOFVB---C.G.S.X.
0.166e-37155Hordeum vulgareContig8057_atContig8057--1e-36At3g13235ubiquitin family proteinC.G.S.X.
0.264e-47190Oryza sativaOs02g0198600AK067974.1-Peptidase aspartic family protein6e-42At3g13235ubiquitin family proteinC.G.S.X.
0.402e-104381Populus trichocarpaPtpAffx.31463.1.S1_a_atCV255385hypothetical protein-2e-66At3g13235ubiquitin family proteinC.G.S.X.
0.028e-136Triticum aestivumTaAffx.86814.3.S1_atCA665753--4e-3At1g63900zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.402e-63242Vitis vinifera1611845_atCF209513hypothetical protein LOC100248128-5e-38At3g13235ubiquitin family proteinC.G.S.X.
0.156e-1271Zea maysZm.6084.1.A1_atAW179372--5e-4At3g13235ubiquitin family proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage