Gene omics information

Query gene ID	Gma.593.1.S1_x_at
Gene name	MYB transcription factor MYB176
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.73	88.9	Gma.593.1.S1_x_at	AW351331	MYB transcription factor MYB176	-	1e-11	At1g74840	myb family transcription factor	S.X.	H.G.	Please select
0.73	88.9	Gma.593.2.S1_x_at	CA800286	MYB transcription factor MYB173	-	2e-9	At1g74840	myb family transcription factor	S.X.	H.G.	Please select
0.67	86.1	Gma.593.3.S1_at	CA801787	MYB transcription factor MYB173 /// MYB transcription factor MYB176	-	6e-12	At1g74840	myb family transcription factor	S.X.	H.G.	Please select
0.67	86.1	Gma.593.2.S1_a_at	CA800286	MYB transcription factor MYB173 /// MYB transcription factor MYB176	-	2e-9	At1g74840	myb family transcription factor	S.X.	H.G.	Please select
0.36	50.8	Gma.2831.1.S1_s_at	AW349413	-	-	1e-8	At1g66140	ZFP4 (ZINC FINGER PROTEIN 4)	S.X.	H.G.	Please select
0.21	26.6	GmaAffx.93131.1.S1_s_at	CF807895	-	-	3e-2	At3g21510	AHP1 (HISTIDINE-CONTAINING PHOSPHOTRANSMITTER 1)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
4.3	97.5	GSM209579	susceptible_24hours_rep1 *failed QC*	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
4.3	97.5	GSM293380	65_1594.1Q.R302P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.2	97.4	GSM293018	23_1094.1N.R057P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9	97.1	GSM293557	70_2036.2A.R165P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.8	97.0	GSM293504	22_2048.2A.R306P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.7	96.8	GSM171651	22_W.K.M.5, Experimental replicate W	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
3.7	96.8	GSM171611	13_W.E.M.5, Experimental replicate W	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
3.6	96.7	GSM171671	27_W.E.M.3, Experimental replicate W	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
3.6	96.7	GSM292709	56_1396.1J.R246P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM293229	18_C068.1P.R9P3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.79	0	1263	Gma.593.2.S1_a_at	CA800286	MYB transcription factor MYB173 /// MYB transcription factor MYB176	-	2e-9	At1g74840	myb family transcription factor	C.G.	S.X.	Please select
0.79	0	1263	Gma.593.2.S1_x_at	CA800286	MYB transcription factor MYB173	-	2e-9	At1g74840	myb family transcription factor	C.G.	S.X.	Please select
0.27	3e-158	559	Gma.593.3.S1_a_at	CA801787	MYB transcription factor MYB173 /// MYB transcription factor MYB176	-	6e-12	At1g74840	myb family transcription factor	C.G.	S.X.	Please select
0.27	3e-158	559	Gma.593.3.S1_at	CA801787	MYB transcription factor MYB173 /// MYB transcription factor MYB176	-	6e-12	At1g74840	myb family transcription factor	C.G.	S.X.	Please select
0.37	3e-59	230	Gma.4660.2.S1_s_at	BM520557	MYB transcription factor MYB143 /// MYB transcription factor MYB183	-	5e-14	At1g19000	myb family transcription factor	C.G.	S.X.	Please select
0.15	8e-17	89	GmaAffx.63449.1.S1_at	AW351062	MYB transcription factor MYB138	-	2e-15	At1g70000	DNA-binding family protein	C.G.	S.X.	Please select
0.21	8e-17	89	Gma.4660.3.S1_at	BQ094618	MYB transcription factor MYB143 /// MYB transcription factor MYB183	-	4e-6	At1g19000	myb family transcription factor	C.G.	S.X.	Please select
0.12	5e-15	83	GmaAffx.46074.1.S1_at	BM085710	-	-	1e-2	At1g19000	myb family transcription factor	C.G.	S.X.	Please select
0.21	3e-13	77	Gma.4660.1.S1_at	AW309741	MYB transcription factor MYB143	-	1e+0	At1g28327	-	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.16	1e-11	71	Arabidopsis thaliana	At1g74840	843823	myb family transcription factor	F:transcription factor activity, DNA binding;P:in 9 processes;C:chloroplast;POM	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.06	2e-8	59	Hordeum vulgare	Contig7628_at	Contig7628	-	-	3e-12	At5g56840	DNA-binding family protein	C.G.	S.X.	Please select
0.06	4e-4	48	Oryza sativa	Os10g0561400	AK105558.1	-	Myb, DNA-binding domain containing protein	6e-8	At5g56840	DNA-binding family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.18	3e-19	97	Populus trichocarpa	PtpAffx.208310.1.S1_at	pmrna16528	hypothetical protein	-	3e-19	At1g70000	DNA-binding family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	5e-2	40	Triticum aestivum	Ta.8661.1.S1_at	CA641399	-	-	1e-5	At5g01200	myb family transcription factor	C.G.	S.X.	Please select
0.19	9e-41	167	Vitis vinifera	1621872_s_at	CB005621	hypothetical protein LOC100265707	-	2e-7	At1g74840	myb family transcription factor	C.G.	S.X.	Please select
0.03	2e-2	40	Zea mays	Zm.18132.1.S1_at	CN844872	-	-	2e-1	At5g58900	myb family transcription factor	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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