Gene omics information

Query gene ID Gma.5678.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.6Gma.5678.1.S1_atCD405283--8e-61At1g69410ELF5A-3 (EUKARYOTIC ELONGATION FACTOR 5A-3)S.X.H.G.
0.9198.6Gma.5678.2.S1_a_atCD417564--2e-70At1g69410ELF5A-3 (EUKARYOTIC ELONGATION FACTOR 5A-3)S.X.H.G.
0.6786.1Gma.3626.1.S1_atBE800416--5e-38At2g44100ATGDI1 (ARABIDOPSIS THALIANA GUANOSINE NUCLEOTIDE DIPHOSPHATE DISSOCIATION INHIBITOR 1)S.X.H.G.
0.6080.7Gma.10823.2.S1_atBM307619--2e-82At5g36230eIF4-gamma/eIF5/eIF2-epsilon domain-containing proteinS.X.H.G.
0.5778.8GmaAffx.92103.1.S1_s_atCF806493translationally controlled tumor-like protein-6e-28At3g16640TCTP (TRANSLATIONALLY CONTROLLED TUMOR PROTEIN)S.X.H.G.
0.5071.7Gma.5678.1.S1_a_atCD405283--8e-61At1g69410ELF5A-3 (EUKARYOTIC ELONGATION FACTOR 5A-3)S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.498.6GSM201106Laser capture microdissected (LCM) axis vascular bundle at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
5.698.3GSM147941Laser capture microdissected (LCM) endosperm at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stage
5.498.2GSM147935Laser capture microdissected (LCM) embryo proper at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stage
4.797.8GSM309343transgenic RNAiOleosin, biol rep 1, tech rep 1GSE12300Suppression of oleosin in soybean cotyledon
4.397.5GSM309342Wild type 2GSE12300Suppression of oleosin in soybean cotyledon
4.297.4GSM201105Laser capture microdissected (LCM) axis shoot meristem at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
4.197.3GSM309341Wild type 1GSE12300Suppression of oleosin in soybean cotyledon
4.097.2GSM29358920_2073.2B.R308L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.097.2GSM309528storage protein suppression expt, control tech rep2GSE12314Storage Protein Suppression in Transgenic Soybean Cotyledons
4.097.2GSM309344transgenic RNAiOleosin, biol rep 1, tech rep 2GSE12300Suppression of oleosin in soybean cotyledon
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9401443Gma.5678.1.S1_a_atCD405283--8e-61At1g69410ELF5A-3 (EUKARYOTIC ELONGATION FACTOR 5A-3)C.G.S.X.
0.9401443Gma.5678.1.S1_x_atCD405283--8e-61At1g69410ELF5A-3 (EUKARYOTIC ELONGATION FACTOR 5A-3)C.G.S.X.
0.8101005Gma.5678.2.S1_a_atCD417564--2e-70At1g69410ELF5A-3 (EUKARYOTIC ELONGATION FACTOR 5A-3)C.G.S.X.
0.700678GmaAffx.92872.1.S1_s_atCF808597--3e-51At1g13950ELF5A-1 (EUKARYOTIC ELONGATION FACTOR 5A-1)C.G.S.X.
0.517e-170597Gma.15407.1.S1_atCD416757--2e-50At1g13950ELF5A-1 (EUKARYOTIC ELONGATION FACTOR 5A-1)C.G.S.X.
0.504e-159561Gma.5678.3.S1_atCA800446--4e-61At1g26630FBR12 (FUMONISIN B1-RESISTANT12)C.G.S.X.
0.565e-134478GmaAffx.91554.1.S1_s_atCF807279--2e-63At1g26630FBR12 (FUMONISIN B1-RESISTANT12)C.G.S.X.
0.539e-114410Gma.15407.2.S1_s_atBU763329--4e-38At1g69410ELF5A-3 (EUKARYOTIC ELONGATION FACTOR 5A-3)C.G.S.X.
0.578e-65248Gma.6129.2.S1_s_atAW186006--1e-34At1g69410ELF5A-3 (EUKARYOTIC ELONGATION FACTOR 5A-3)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.488e-61234Arabidopsis thalianaAt1g69410843273ELF5A-3 (EUKARYOTIC ELONGATION FACTOR 5A-3)Encodes eIF5A-2, a putative eukaryotic translation initiation factor. There are three eIF5A coding genes in Arabidopsis: eIF5A-1/At1g13950, eIF5A-2/At1g26630 and eIF5A-3/At1g69410.---C.G.S.X.
0.432e-75282Hordeum vulgareContig2581_atContig2581--2e-68At1g13950ELF5A-1 (EUKARYOTIC ELONGATION FACTOR 5A-1)C.G.S.X.
0.441e-70268Oryza sativaOs03g0758800AK060387.1-Eukaryotic translation initiation factor 5A-2(eIF-5A) (eIF-4D)7e-31At1g69410ELF5A-3 (EUKARYOTIC ELONGATION FACTOR 5A-3)C.G.S.X.
0.474e-76286Populus trichocarpaPtpAffx.249.122.S1_atCV276086hypothetical protein-1e-41At1g69410ELF5A-3 (EUKARYOTIC ELONGATION FACTOR 5A-3)C.G.S.X.
0.516e-65248Triticum aestivumTa.1305.2.S1_x_atBJ291943--9e-60At1g13950ELF5A-1 (EUKARYOTIC ELONGATION FACTOR 5A-1)C.G.S.X.
0.457e-74276Vitis vinifera1607236_atCF206372.1--2e-46At1g13950ELF5A-1 (EUKARYOTIC ELONGATION FACTOR 5A-1)C.G.S.X.
0.362e-87321Zea maysZm.761.1.S1_atCF053892hypothetical protein LOC100192991-6e-37At1g26630FBR12 (FUMONISIN B1-RESISTANT12)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage