Gene omics information

Query gene ID Gma.5662.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6786.1Gma.5662.1.S1_atBM140147--3e-5At5g39950ATTRX2 (THIOREDOXIN 2)S.X.H.G.
0.4057.1Gma.7487.1.S1_atAW309945--3e-11At1g58360AAP1 (AMINO ACID PERMEASE 1)S.X.H.G.
0.1518.7Gma.7487.3.S1_atBQ453973--4e-26At5g49630AAP6 (AMINO ACID PERMEASE 6)S.X.H.G.
0.0811.0Gma.4687.1.S1_atAW309716--7e-4At5g44400FAD-binding domain-containing proteinS.X.H.G.
0.013.4GmaAffx.7932.2.S1_atBE211513--6e-2At2g42350zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.013.4GmaAffx.35331.1.S1_atBI967623--9e-1At4g30670unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
19.899.7GSM2923337_C085.1E.SLE3U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
15.699.6GSM29224356_C025.1B.SLB2U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
13.499.5GSM29222317_C025.1B.SLB2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.499.3GSM29312337_1111.1O.R071U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.299.2GSM29312135_1110.1O.R069P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.799.1GSM29402475_2265.2F.R123U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.299.0GSM29231058_C085.1E.SLE3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.799.0GSM2449226_CON.M3W4.CEL, Experimental replicate 4GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
7.598.9GSM29399246_2258.2F.R277P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.498.9GSM29354963_2011.2A.R282U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.256e-32139Gma.3160.1.S1_atBG507816--1e-1At1g59730ATH7 (thioredoxin H-type 7)C.G.S.X.
0.032e-138Gma.5721.2.S1_atCD409929--8e-12At1g31020ATO2 (Arabidopsis thioredoxin o2)C.G.S.X.
0.013e+034PsAffx.C3000035_atPsAffx.C3000035--7e-1At1g07340ATSTP2 (SUGAR TRANSPORTER 2)C.G.S.X.
0.013e+034PsAffx.C2000214_atPsAffx.C2000214--8e-2At4g30230unknown proteinC.G.S.X.
0.033e+034GmaAffx.87834.1.S1_atBQ785824Developing seed beta-ketoacyl-ACP synthetase 2 mRNA, complete cds; nuclear gene for proplastid product-5e-5At3g26790FUS3 (FUSCA 3)C.G.S.X.
0.013e+034Gma.4222.1.S1_atBU083971--7e-1At5g19510elongation factor 1B alpha-subunit 2 (eEF1Balpha2)C.G.S.X.
0.023e+034Gma.13547.1.A1_atBI971419--2e-5At4g11440bindingC.G.S.X.
0.021e+132PsAffx.psMA013xF23f_atPsAffx.psMA013xF23f--9e-1At5g23520-C.G.S.X.
0.011e+132PsAffx.C3000224_atPsAffx.C3000224--4e-2At1g22220F-box family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.063e-550Arabidopsis thalianaAt5g39950833992ATTRX2 (THIOREDOXIN 2)encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells.---C.G.S.X.
0.041e-654Hordeum vulgareAJ009762.1_atAJ009762.1--3e-7At1g19730ATTRX4C.G.S.X.
0.031e+132Oryza sativaOs05g02231019633.m01174--6e-1At2g05840PAA2 (20S PROTEASOME SUBUNIT PAA2)C.G.S.X.
0.051e+132Populus trichocarpaPtpAffx.31831.1.S1_atCV252897--2e-15At3g51030ATTRX1C.G.S.X.
0.042e-654Triticum aestivumTa.24466.1.S1_x_atCK213031Thioredoxin h-4e-7At1g19730ATTRX4C.G.S.X.
0.131e-446Vitis vinifera1621058_atCF205681.1--8e-2At3g15360TRX-M4 (ARABIDOPSIS THIOREDOXIN M-TYPE 4)C.G.S.X.
0.032e-136Zea maysZm.4495.1.A1_atAY106053.1--4e+0At4g11880AGL14 (agamous-like 14)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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