Gene omics information

Query gene ID Gma.5641.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8291.9Gma.5641.1.S1_atAW349077--1e-82At5g59840Ras-related GTP-binding family proteinS.X.H.G.
0.6382.9GmaAffx.5376.10.S1_s_atBU082924--2e-10At2g18600RUB1-conjugating enzyme, putativeS.X.H.G.
0.6080.7Gma.10823.2.S1_atBM307619--2e-82At5g36230eIF4-gamma/eIF5/eIF2-epsilon domain-containing proteinS.X.H.G.
0.5576.3GmaAffx.74684.1.S1_atBU547287--1e+0At1g27970NTF2B (NUCLEAR TRANSPORT FACTOR 2B)S.X.H.G.
0.5374.2Gma.16949.1.S1_atBI945119--1e-4At1g01650aspartic-type endopeptidase/ peptidaseS.X.H.G.
0.5374.2Gma.7528.1.S1_s_atCD415645--5e-10At3g06720IMPA-1 (IMPORTIN ALPHA ISOFORM 1)S.X.H.G.
0.5071.7Gma.11929.1.S1_x_atAI437723HMG-1 like protein gene-2e-13At1g20693HMGB2 (HIGH MOBILITY GROUP B 2)S.X.H.G.
0.4968.3Gma.933.1.S1_atCD401061--1e-25At5g54750transport protein particle (TRAPP) component Bet3, putativeS.X.H.G.
0.4867.7Gma.3861.1.S1_atCD406972--3e-4At1g75850VPS35B (VPS35 HOMOLOG B)S.X.H.G.
0.4766.6Gma.3626.1.S1_atBE800416--5e-38At2g44100ATGDI1 (ARABIDOPSIS THALIANA GUANOSINE NUCLEOTIDE DIPHOSPHATE DISSOCIATION INHIBITOR 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
7.899.0GSM201120Laser capture microdissected (LCM) seed coat hourglass at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
7.598.9GSM201121Laser capture microdissected (LCM) seed coat hourglass at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
7.398.9GSM191087Soybean_Cotyledon_II1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stage
7.098.8GSM147939Laser capture microdissected (LCM) endosperm at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stage
5.698.3GSM29321595_C050.1O.SLO3P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.298.1GSM147942Laser capture microdissected (LCM) endothelium at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stage
5.198.1GSM147940Laser capture microdissected (LCM) endosperm at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stage
4.897.9GSM201126Laser capture microdissected (LCM) seed coat parenchyma at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
4.397.5GSM201130Laser capture microdissected (LCM) endosperm at the heart stage, biological replicate 3GSE7511Expression data from soybean seed compartments with embryos at the heart stage
4.197.3GSM201122Laser capture microdissected (LCM) seed coat hilum at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.352e-131470Gma.8627.2.S1_atBE607986--2e-64At3g46060ATRAB8AC.G.S.X.
0.401e-110400Gma.11282.1.S1_atAI443415--2e-62At3g53610ATRAB8C.G.S.X.
0.383e-102373Gma.14354.1.S1_x_atAW755388--3e-67At3g53610ATRAB8C.G.S.X.
0.383e-102373Gma.14354.1.S1_atAW755388--3e-67At3g53610ATRAB8C.G.S.X.
0.411e-89331GmaAffx.93385.1.S1_x_atCF806095--1e-68At3g46060ATRAB8AC.G.S.X.
0.411e-89331GmaAffx.93385.1.S1_atCF806095--1e-68At3g46060ATRAB8AC.G.S.X.
0.464e-86319GmaAffx.91170.1.S1_x_atCF806895--5e-58At3g46060ATRAB8AC.G.S.X.
0.464e-86319GmaAffx.91170.1.S1_s_atCF806895--5e-58At3g46060ATRAB8AC.G.S.X.
0.333e-68260Gma.14354.2.S1_atBI472159--3e-53At5g59840Ras-related GTP-binding family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.511e-82307Arabidopsis thalianaAt5g59840836105Ras-related GTP-binding family proteinF:GTP binding;P:protein transport, small GTPase mediated signal transduction;C:plasma membrane;MOFPBVA---C.G.S.X.
0.372e-51202Hordeum vulgareContig3337_s_atContig3337--5e-50At5g59840Ras-related GTP-binding family proteinC.G.S.X.
0.385e-74280Oryza sativaOs03g0819900AY576526.1-Ethylene-responsive small GTP-binding protein4e-82At3g09900ATRABE1E (ARABIDOPSIS RAB GTPASE HOMOLOG E1E)C.G.S.X.
0.464e-120432Populus trichocarpaPtp.2072.2.S1_s_atCA931719hypothetical protein-6e-83At3g46060ATRAB8AC.G.S.X.
0.341e-45184Triticum aestivumTa.6968.1.S1_atCK196001--1e-45At3g53610ATRAB8C.G.S.X.
0.441e-162571Vitis vinifera1619471_atBQ794353hypothetical protein LOC100243217-1e-112At3g46060ATRAB8AC.G.S.X.
0.346e-58224Zea maysZm.6039.1.A1_atBG837895--9e-65At5g03520ATRAB8CC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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