Gene omics information

Query gene ID Gma.5594.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.6Gma.5594.1.S1_atBQ786297--1e-9At3g09840CDC48 (CELL DIVISION CYCLE 48)S.X.H.G.
0.7388.9GmaAffx.39725.1.S1_atBI945410--8e-1At3g57280unknown proteinS.X.H.G.
0.7388.9Gma.14945.1.S1_atBG157566--2e-1At3g12210sequence-specific DNA bindingS.X.H.G.
0.7388.9Gma.7635.1.S1_atAW310136--9e-7At2g41790peptidase M16 family protein / insulinase family proteinS.X.H.G.
0.5778.8GmaAffx.43676.1.S1_atAW234124--8e-7At2g47510FUM1 (FUMARASE 1)S.X.H.G.
0.3650.8GmaAffx.34569.1.S1_s_atAW306183--1e+1Atcg00130-S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.098.5GSM182033Laser capture microdissected (LCM) suspensor at the heart stage, biological replicate 2GSE7511Expression data from soybean seed compartments with embryos at the heart stage
5.598.3GSM29319779_C053.1O.R9O3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.498.2GSM182034Laser capture microdissected (LCM) suspensor at the heart stage, biological replicate 3GSE7511Expression data from soybean seed compartments with embryos at the heart stage
4.998.0GSM29311328_C047.1O.R9O2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.097.2GSM182032Laser capture microdissected (LCM) suspensor at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stage
3.696.7GSM1717208_Y.E.I.5, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
3.696.7GSM29338267_1583.1Q.R209L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.596.6GSM29227419_C089.1E.R9E3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.596.6GSM17160511_Z.E.I.5, Experimental replicate ZGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
3.496.4GSM29321393_C039.1O.SLO1L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.546e-62238Gma.14945.1.S1_atBG157566--2e-1At3g12210sequence-specific DNA bindingC.G.S.X.
0.322e-37157Gma.9274.1.S1_atCA819534--8e-14At3g09840CDC48 (CELL DIVISION CYCLE 48)C.G.S.X.
0.126e-28125Gma.4013.1.S1_atU20213.1plamsma membrane-associated AAA-ATPase-0At5g03340cell division cycle protein 48, putative / CDC48, putativeC.G.S.X.
0.137e-652GmaAffx.15905.1.S1_atAW349532--2e-29At5g03340cell division cycle protein 48, putative / CDC48, putativeC.G.S.X.
0.051e-448Gma.6426.2.S1_atAW307409--2e-2At4g13100zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.041e-138GmaAffx.84965.1.S1_atBU550358--8e-5At2g27285unknown proteinC.G.S.X.
0.034e-136HgAffx.10114.1.S1_atCB378387--1e+0At5g47210nuclear RNA-binding protein, putativeC.G.S.X.
0.034e-136GmaAffx.92049.1.S1_atCF807774--1e+0At5g56550OXS3 (OXIDATIVE STRESS 3)C.G.S.X.
0.034e-136GmaAffx.70975.2.S1_atBG790871--2e-2At5g29070-C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.131e-963Arabidopsis thalianaAt3g09840820142CDC48 (CELL DIVISION CYCLE 48)Encodes a cell division cycle protein, a member of AAA-type ATPases gene family. Expressed throughout the plant in regions of cell division. Within the cell, sub-cellular localization varies depending on the stage of the cell cycle.Mutants in which the expression of CDC48A is altered show defects in cytokinesis, cell expansion and cell differentiation.---C.G.S.X.
0.333e-1581Hordeum vulgareContig2034_s_atContig2034--3e-44At3g09840CDC48 (CELL DIVISION CYCLE 48)C.G.S.X.
0.101e-861Oryza sativaOs03g0151800AK098980.1-Cell division control protein 48 homolog A(AtCDC48a)0At3g09840CDC48 (CELL DIVISION CYCLE 48)C.G.S.X.
0.284e-38159Populus trichocarpaPtp.650.1.S1_atCV253495hypothetical protein-2e-37At3g53230cell division cycle protein 48, putative / CDC48, putativeC.G.S.X.
0.102e-1583Triticum aestivumTa.28850.1.S1_atBJ262711--1e-167At3g09840CDC48 (CELL DIVISION CYCLE 48)C.G.S.X.
0.247e-49192Vitis vinifera1618931_atCB973378hypothetical protein LOC100265402-2e-31At3g09840CDC48 (CELL DIVISION CYCLE 48)C.G.S.X.
0.253e-1891Zea maysZm.1177.2.A1_atAW520081--3e-42At3g53230cell division cycle protein 48, putative / CDC48, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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