Gene omics information

Query gene ID Gma.541.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6986.8Gma.541.1.S1_atAW156279--5e-70At5g57110ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8)S.X.H.G.
0.5678.2Gma.8062.1.A1_atBI971176--1e-7At2g21630transport protein, putativeS.X.H.G.
0.4867.7GmaAffx.93465.1.A1_s_atCF809190--3e-1At5g23340-S.X.H.G.
0.4867.7Gma.10825.1.S1_atCD407330--1e-3At3g01435Expressed proteinS.X.H.G.
0.4563.9Gma.2835.1.S1_atBI969866--4e-40At5g23450ATLCBK1 (A. THALIANA LONG-CHAIN BASE (LCB) KINASE 1)S.X.H.G.
0.4360.6Gma.11556.1.A1_atCD401368--1e-1At5g08080SYP132 (SYNTAXIN OF PLANTS 132)S.X.H.G.
0.4360.6GmaAffx.5376.10.S1_s_atBU082924--2e-10At2g18600RUB1-conjugating enzyme, putativeS.X.H.G.
0.4259.3Gma.5514.1.S1_atAB060000.1hypothetical protein LOC547474-1e-37At1g26110unknown proteinS.X.H.G.
0.4158.1GmaAffx.43038.1.S1_atBI969804--2e+0At5g48030GFA2 (GAMETOPHYTIC FACTOR 2)S.X.H.G.
0.4057.1Gma.10829.1.S1_atCD404695--1e-4At2g28360-S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
8.599.1GSM29321595_C050.1O.SLO3P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.999.0GSM201117Laser capture microdissected (LCM) cotyledon vascular bundle at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
6.498.6GSM182033Laser capture microdissected (LCM) suspensor at the heart stage, biological replicate 2GSE7511Expression data from soybean seed compartments with embryos at the heart stage
5.798.4GSM182030Laser capture microdissected (LCM) embryo proper at the heart stage, biological replicate 2GSE7511Expression data from soybean seed compartments with embryos at the heart stage
5.498.2GSM201127Laser capture microdissected (LCM) seed coat parenchyma at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
5.298.1GSM182031Laser capture microdissected (LCM) embryo proper at the heart stage, biological replicate 3GSE7511Expression data from soybean seed compartments with embryos at the heart stage
4.497.6GSM184826Young trifoliate leaf, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stage
4.497.6GSM191087Soybean_Cotyledon_II1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stage
4.397.5GSM29312740_1148.1O.R093P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.397.5GSM29222115_C026.1B.SLB2P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.336e-95349Gma.6528.2.S1_atCA784209--8e-1At4g34150C2 domain-containing proteinC.G.S.X.
0.282e-54214Gma.3527.1.S1_atAW733755--7e-69At3g21180ACA9 (AUTOINHIBITED CA(2+)-ATPASE 9)C.G.S.X.
0.035e-1273Gma.1178.1.S1_a_atAF195029.1plasma membrane Ca2+-ATPase-2e-74At1g27770ACA1 (AUTO-INHIBITED CA2+-ATPASE 1)C.G.S.X.
0.035e-1273Gma.1178.1.S1_atAF195029.1plasma membrane Ca2+-ATPase-2e-74At1g27770ACA1 (AUTO-INHIBITED CA2+-ATPASE 1)C.G.S.X.
0.042e-861Gma.6344.1.S1_s_atBU765544--5e-63At2g41560ACA4 (AUTO-INHIBITED CA(2+)-ATPASE, ISOFORM 4)C.G.S.X.
0.047e-550Gma.1047.1.S1_atAF195028.1plasma membrane Ca2+-ATPase-2e-64At2g22950calcium-transporting ATPase, plasma membrane-type, putative / Ca2+-ATPase, putative (ACA7)C.G.S.X.
0.023e-138HgAffx.7020.1.S1_atCB825191--5e+0At5g18170GDH1 (GLUTAMATE DEHYDROGENASE 1)C.G.S.X.
0.053e-138Gma.6528.1.A1_atBQ298497--2e-1At5g42820U2AF35BC.G.S.X.
0.011e+036PsAffx.C19000126_atPsAffx.C19000126--4e+0At4g17600LIL3:1C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.235e-70266Arabidopsis thalianaAt5g57110835815ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8)Arabidopsis-autoinhibited Ca2+ -ATPase, isoform 8, contains all of the characteristic motifs of Ca2+ -transporting P-type Ca2+ -ATPases and is localized to the plasma membrane.---C.G.S.X.
0.199e-36151Hordeum vulgareContig6173_atContig6173--2e-36At3g21180ACA9 (AUTOINHIBITED CA(2+)-ATPASE 9)C.G.S.X.
0.211e-72276Oryza sativaOs08g0517200AK058787.1-Potential calcium-transporting ATPase 9, plasmamembrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 9)1e-39At4g29900ACA10 (AUTOINHIBITED CA(2+)-ATPASE 10)C.G.S.X.
0.312e-107391Populus trichocarpaPtp.2372.1.S1_atCK087471autoinhibited calcium ATPase-3e-59At3g21180ACA9 (AUTOINHIBITED CA(2+)-ATPASE 9)C.G.S.X.
0.192e-35151Triticum aestivumTa.9178.1.S1_atCD452861--7e-17At4g29900ACA10 (AUTOINHIBITED CA(2+)-ATPASE 10)C.G.S.X.
0.365e-92337Vitis vinifera1614028_atCB976052hypothetical protein LOC100259808-1e-55At5g57110ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8)C.G.S.X.
0.223e-63242Zea maysZm.17277.1.S1_atCF273093--1e-45At5g57110ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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