Gene omics information

Query gene ID Gma.52.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.3346.1Gma.52.1.S1_atAW200671--1e-27At3g21720ICL (ISOCITRATE LYASE)S.X.H.G.
0.3040.4GmaAffx.18940.1.S1_atBM177235--6e-5At2g28210ATACA2 (ALPHA CARBONIC ANHYDRASE 2)S.X.H.G.
0.2939.0Gma.12009.1.S1_atBG507984--3e+0At5g24200triacylglycerol lipaseS.X.H.G.
0.2329.9Gma.8510.1.S1_atAB052787.1NRT1-4 protein-9e-15At1g69870proton-dependent oligopeptide transport (POT) family proteinS.X.H.G.
0.1013.0GmaAffx.51962.1.S1_atBF424169--2e-1At5g15830AtbZIP3 (Arabidopsis thaliana basic leucine-zipper 3)S.X.H.G.
0.0811.0GmaAffx.86033.1.S1_atBE609302--1e+0At4g26010peroxidase, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
910.0100.0GSM209596resistant_24hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
882.5100.0GSM209594resistant_12hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
84.1100.0GSM29273075_C165.1J.R9J1L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
76.7100.0GSM209597susceptible_24hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
35.799.9GSM29229239_C075.1E.R9E1L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
25.599.8GSM209595susceptible_12hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
23.199.8GSM29238459_C093.1F.R9F1L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
21.799.8GSM29252237_C129.1H.R9H1L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
19.899.7GSM2930807_C033.1N.R9N3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
16.099.6GSM29319779_C053.1O.R9O3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.8901911Gma.1746.1.S1_s_atAW350407--3e-25At3g21720ICL (ISOCITRATE LYASE)C.G.S.X.
0.8901911Gma.1746.1.S1_atAW350407--3e-25At3g21720ICL (ISOCITRATE LYASE)C.G.S.X.
0.044e-138PsAffx.C125000016_s_atPsAffx.C125000016--5e-5At3g21720ICL (ISOCITRATE LYASE)C.G.S.X.
0.001e+036PsAffx.C48000065_atPsAffx.C48000065--9e-1At5g64290DIT2.1 (DICARBOXYLATE TRANSPORT 2.1)C.G.S.X.
0.011e+036GmaAffx.85102.1.S1_atAW759665--8e-1At1g61340F-box family proteinC.G.S.X.
0.011e+036GmaAffx.14058.1.A1_atBE658390--2e-8At1g77610glucose-6-phosphate/phosphate translocator-relatedC.G.S.X.
0.011e+036Gma.4567.1.S1_atCD393931--1e-20At5g06110DNAJ heat shock N-terminal domain-containing protein / cell division protein-relatedC.G.S.X.
0.016e+034PsAffx.psHB014xC10f_atPsAffx.psHB014xC10f--7e-5At5g08170EMB1873 (EMBRYO DEFECTIVE 1873)C.G.S.X.
0.016e+034PsAffx.C23000052_atPsAffx.C23000052--2e+0At4g13720inosine triphosphate pyrophosphatase, putative / HAM1 family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.281e-27125Arabidopsis thalianaAt3g21720821726ICL (ISOCITRATE LYASE)Encodes a glyoxylate cycle enzyme isocitrate lyase (ICL).---C.G.S.X.
0.202e-1377Hordeum vulgareContig8703_atContig8703--2e-42At3g21720ICL (ISOCITRATE LYASE)C.G.S.X.
0.132e-656Oryza sativaOs07g0529000AK103744.1-Isocitrate lyase (EC 4.1.3.1) (Isocitrase)(Isocitratase) (ICL)2e-39At3g21720ICL (ISOCITRATE LYASE)C.G.S.X.
0.202e-861Populus trichocarpaPtpAffx.161491.2.S1_s_atBU873061hypothetical protein-8e-14At3g21720ICL (ISOCITRATE LYASE)C.G.S.X.
0.143e-1067Triticum aestivumTaAffx.99992.1.S1_atCA593620--5e-35At3g21720ICL (ISOCITRATE LYASE)C.G.S.X.
0.013e-136Vitis vinifera1609021_atCF517705similar to MYB transcription factor MYB139-8e-2At5g59780MYB59 (MYB DOMAIN PROTEIN 59)C.G.S.X.
0.052e-344Zea maysZm.18305.1.A1_atCO533683Isocitrate lyase-1e-9At3g21720ICL (ISOCITRATE LYASE)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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