CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Gma.4843.1.A1_at

Gene name

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 86.1 Gma.4843.1.A1_at BI969381 - - 1e+1 At5g60430 antiporter/ drug transporter S.X. H.G.
0.67 86.1 Gma.374.2.S1_at AI494929 - - 1e+0 At2g47140 short-chain dehydrogenase/reductase (SDR) family protein S.X. H.G.
0.57 78.8 Gma.6494.1.S1_at BI784551 - - 3e-41 At2g12646 - S.X. H.G.
0.50 71.7 Gma.374.1.A1_at AW309650 - - 1e-3 At3g29250 copper ion binding / oxidoreductase S.X. H.G.
0.47 66.6 Gma.6414.1.S1_at BE659785 - - 5e-3 At5g57770 - S.X. H.G.
0.35 48.6 Gma.405.1.A1_at AI443411 - - 3e-3 At5g12940 leucine-rich repeat family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
19.5 99.7 GSM294022 73_2244.2F.R060P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
13.9 99.6 GSM293103 19_1122.1O.R077P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
11.4 99.4 GSM293121 35_1110.1O.R069P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.6 99.3 GSM293148 5_1147.1O.R093U, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.0 99.3 GSM293799 42_2160.2D.R076P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.2 99.2 GSM293747 7_2141.2C.R116L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.0 99.2 GSM294469 36_2484.2K.R271P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.9 99.2 GSM293128 41_1112.1O.R071P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.7 99.1 GSM293131 44_1108.1O.R067P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.3 99.1 GSM294370 30_2440.2J.R135P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 2e-1 36 HgAffx.24340.1.S1_at BF013509 - - 3e-2 At3g59800 unknown protein C.G. S.X.
0.02 4e+0 32 PsAffx.C9000051_at PsAffx.C9000051 - - 2e+0 At5g23950 C2 domain-containing protein C.G. S.X.
0.05 4e+0 32 HgAffx.23825.1.S1_at BF014024 - - 2e+0 At5g37260 RVE2 (REVEILLE 2) C.G. S.X.
0.06 4e+0 32 GmaAffx.88177.1.S1_s_at BU764117 - - 2e+0 At5g58782 dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putative C.G. S.X.
0.04 4e+0 32 GmaAffx.59606.1.S1_at BI787321 - - 3e+0 At3g46020 RNA-binding protein, putative C.G. S.X.
0.04 4e+0 32 GmaAffx.3729.1.S1_at BM188885 - - 9e-11 At5g19750 peroxisomal membrane 22 kDa family protein C.G. S.X.
0.03 4e+0 32 Gma.7840.1.A1_at AI856394 - - 2e+0 At1g73640 AtRABA6a (Arabidopsis Rab GTPase homolog A6a) C.G. S.X.
0.04 4e+0 32 Gma.12962.1.A1_at CD397613 - - 7e-1 At3g44440 unknown protein C.G. S.X.
0.03 4e+0 32 Gma.11316.3.S1_s_at BM093897 - - 2e-42 At3g16080 60S ribosomal protein L37 (RPL37C) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 1e+1 30 Arabidopsis thaliana At5g60430 836164 antiporter/ drug transporter F:drug transporter activity, antiporter activity;P:multidrug transport;C:membrane;P - - - C.G. S.X.
0.04 5e+0 30 Hordeum vulgare HU10E12u_s_at HU10E12u - - 8e-1 At4g08395 unknown protein C.G. S.X.
0.02 5e+0 32 Oryza sativa Os09g0267400 AK070630.1 - Harpin-induced 1 domain containing protein 3e-2 At5g19340 unknown protein C.G. S.X.
0.04 2e-1 36 Populus trichocarpa PtpAffx.126945.1.A1_s_at CV278596 hypothetical protein - 1e+0 At2g29320 tropinone reductase, putative / tropine dehydrogenase, putative C.G. S.X.
0.04 2e-1 36 Triticum aestivum TaAffx.102558.1.S1_x_at BJ247426 - - 1e+0 At5g52965 unknown protein C.G. S.X.
0.04 8e-1 32 Vitis vinifera 1609883_at CF513082 - - 2e-17 At1g09290 unknown protein C.G. S.X.
0.04 5e+0 30 Zea mays Zm.6105.1.S1_at BG517834 - - 4e+0 At2g27280 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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