Gene omics information

Query gene ID	Gma.4739.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	86.1	Gma.4739.1.S1_at	CF922021	-	-	2e-19	At4g21570	unknown protein	S.X.	H.G.	Please select
0.63	82.9	Gma.5057.1.S1_at	AW310849	-	-	2e-25	At5g13440	ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putative	S.X.	H.G.	Please select
0.61	81.8	Gma.5057.2.S1_x_at	BE475334	-	-	7e-21	At5g13430	ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putative	S.X.	H.G.	Please select
0.60	80.7	Gma.5057.2.S1_at	BE475334	-	-	7e-21	At5g13430	ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putative	S.X.	H.G.	Please select
0.55	76.3	Gma.6376.1.S1_at	BI967280	-	-	4e-1	At5g08060	unknown protein	S.X.	H.G.	Please select
0.54	74.8	Gma.11798.1.S1_s_at	BM525482	-	-	8e-2	At1g68680	unknown protein	S.X.	H.G.	Please select
0.45	63.9	Gma.6258.1.S1_s_at	AW349094	-	-	2e-5	At4g32470	ubiquinol-cytochrome C reductase complex 14 kDa protein, putative	S.X.	H.G.	Please select
0.42	59.3	Gma.5057.2.S1_s_at	BE475334	-	-	7e-21	At5g13430	ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putative	S.X.	H.G.	Please select
0.42	59.3	GmaAffx.88771.1.A1_s_at	CK605912	-	-	1e+0	At4g27840	-	S.X.	H.G.	Please select
0.35	48.6	Gma.6351.1.S1_at	AW349648	-	-	4e-74	At4g26910	2-oxoacid dehydrogenase family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
7.9	99.0	GSM170928	V2 Control, biological rep3	GSE7108	Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stage
7.0	98.8	GSM209598	resistant_48hours_rep3	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
4.7	97.8	GSM170927	Rust Innoculated, biological rep2	GSE7108	Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stage
4.0	97.2	GSM292910	83_1471.1L.R286L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.8	97.0	GSM209599	susceptible_48hours_rep3	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
3.8	97.0	GSM170929	Rust Innoculated, biological rep3	GSE7108	Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stage
3.2	96.0	GSM292901	75_1457.1L.R279U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM293601	31_2069.2B.R213L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM293217	97_1131.1O.R083U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM293129	42_1127.1O.R081L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.13	3e-12	73	GmaAffx.83657.1.S1_at	BI316738	-	-	1e-12	At4g21570	unknown protein	C.G.	S.X.	Please select
0.07	3e-6	54	GmaAffx.83657.2.S1_at	BU925917	-	-	2e-3	At4g21570	unknown protein	C.G.	S.X.	Please select
0.03	4e-2	40	GmaAffx.4935.2.S1_at	BI701015	-	-	1e-2	At4g19420	pectinacetylesterase family protein	C.G.	S.X.	Please select
0.03	7e-1	36	GmaAffx.38074.1.S1_at	BU761714	-	-	3e+0	At5g35740	glycosyl hydrolase family protein 17	C.G.	S.X.	Please select
0.01	3e+0	34	PsAffx.C62000066_at	PsAffx.C62000066	-	-	3e-1	At3g60620	phosphatidate cytidylyltransferase family protein	C.G.	S.X.	Please select
0.02	3e+0	34	HgAffx.9568.1.S1_at	CB379074	-	-	1e+0	At2g36690	oxidoreductase, 2OG-Fe(II) oxygenase family protein	C.G.	S.X.	Please select
0.02	3e+0	34	HgAffx.7779.1.S1_at	CB824432	-	-	8e-2	At5g15690	-	C.G.	S.X.	Please select
0.02	3e+0	34	GmaAffx.44305.1.S1_at	BU551393	-	-	3e-8	At3g05010	transmembrane protein, putative	C.G.	S.X.	Please select
0.02	3e+0	34	GmaAffx.40855.4.S1_at	BG510947	-	-	6e-5	At3g05510	phospholipid/glycerol acyltransferase family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.29	2e-19	97	Arabidopsis thaliana	At4g21570	828242	unknown protein	F:unknown;P:biological_process unknown;C:endomembrane system;MFPO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.15	2e-7	56	Hordeum vulgare	Contig4073_at	Contig4073	-	-	4e-11	At4g21570	unknown protein	C.G.	S.X.	Please select
0.16	7e-11	69	Oryza sativa	Os07g0506000	AK068687.1	-	Protein of unknown function family protein	2e-4	At4g21570	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.40	8e-53	208	Populus trichocarpa	PtpAffx.216101.1.S1_at	pmrna30681	hypothetical protein	-	2e-12	At4g21570	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.11	2e-3	44	Triticum aestivum	Ta.5360.1.S1_at	CK157600	-	-	3e-6	At4g21570	unknown protein	C.G.	S.X.	Please select
0.29	1e-35	149	Vitis vinifera	1614924_at	BQ792164	-	-	1e-20	At4g21570	unknown protein	C.G.	S.X.	Please select
0.12	6e-11	67	Zea mays	Zm.4374.1.S1_at	BG841590	hypothetical protein LOC100276001	-	7e-11	At1g11200	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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