Gene omics information

Query gene ID	Gma.4470.1.S1_s_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.56	78.2	Gma.4470.1.S1_s_at	AW156251	-	-	2e+0	At5g41401	unknown protein	S.X.	H.G.	Please select
0.57	78.8	GmaAffx.89916.1.S1_s_at	CF805641	-	-	4e-3	At5g61830	short-chain dehydrogenase/reductase (SDR) family protein	S.X.	H.G.	Please select
0.40	57.1	Gma.6719.4.S1_at	BU762353	-	-	2e+0	At5g26848	unknown protein	S.X.	H.G.	Please select
0.36	50.8	GmaAffx.66195.1.S1_at	AI988572	-	-	1e-12	At5g11950	protein homodimerization	S.X.	H.G.	Please select
0.33	46.1	GmaAffx.91496.1.S1_s_at	CF807221	-	-	4e+0	At3g17300	-	S.X.	H.G.	Please select
0.20	25.1	GmaAffx.93301.2.S1_s_at	CF808497	2'-hydroxydihydrodaidzein reductase	-	1e-11	At4g05050	UBQ11 (UBIQUITIN 11)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
10.1	99.3	GSM293553	67_3017.2A.R9A3L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.9	99.3	GSM293577	9_3009.2A.R9A2L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.2	99.2	GSM293226	15_C065.1P.R9P2L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.5	99.1	GSM293543	58_2017.2A.R245L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.4	99.1	GSM293524	40_2027.2A.R196L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.3	99.1	GSM293248	35_1155.1P.R097L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.2	99.0	GSM293284	68_1533.1P.R026L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.1	99.0	GSM293756	88_2113.2C.R285L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.1	99.0	GSM293527	43_2015.2A.R250L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.1	99.0	GSM293053	55_1057.1N.R033L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.95	0	1733	GmaAffx.89235.1.A1_at	CK606548	-	-	2e+0	At5g41401	unknown protein	C.G.	S.X.	Please select
0.86	0	1453	GmaAffx.93534.1.S1_s_at	CF809259	-	-	1e+0	At5g41401	unknown protein	C.G.	S.X.	Please select
0.86	0	1453	GmaAffx.93534.1.S1_at	CF809259	-	-	1e+0	At5g41401	unknown protein	C.G.	S.X.	Please select
0.05	1e-2	42	GmaAffx.57966.1.S1_at	CA784467	-	-	1e-6	At5g52390	photoassimilate-responsive protein, putative	C.G.	S.X.	Please select
0.03	4e-2	40	GmaAffx.92669.1.S1_at	CF808394	-	-	8e-2	At5g55640	unknown protein	C.G.	S.X.	Please select
0.01	4e-2	40	GmaAffx.2833.2.S1_at	BM139673	-	-	1e-36	At3g23820	GAE6 (UDP-D-GLUCURONATE 4-EPIMERASE 6)	C.G.	S.X.	Please select
0.01	2e-1	38	PsAffx.C47000106_at	PsAffx.C47000106	-	-	1e-1	At4g39320	microtubule-associated protein-related	C.G.	S.X.	Please select
0.01	2e-1	38	Gma.4853.2.S1_a_at	BU547313	-	-	2e-51	At5g56290	PEX5 (PEROXIN 5)	C.G.	S.X.	Please select
0.02	2e-1	38	Gma.16221.1.A1_at	CD395886	-	-	8e-18	At3g24190	ABC1 family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	2e+0	34	Arabidopsis thaliana	At5g41401	6240394	unknown protein	F:unknown;P:unknown;C:unknown	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	9e-1	34	Hordeum vulgare	EBpi01_SQ003_I06_at	EBpi01_SQ003_I06	-	-	8e-1	At5g63740	zinc finger protein-related	C.G.	S.X.	Please select
0.03	2e-2	42	Oryza sativa	Os.47292.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.24	3e-46	186	Populus trichocarpa	PtpAffx.95244.1.A1_at	CV255150	hypothetical protein	-	6e-3	At3g54040	photoassimilate-responsive protein-related	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	1e-1	38	Triticum aestivum	TaAffx.111679.2.S1_at	CA636873	-	-	1e-9	At4g35100	PIP3 (PLASMA MEMBRANE INTRINSIC PROTEIN 3)	C.G.	S.X.	Please select
0.02	9e-3	40	Vitis vinifera	1608934_at	CF405409	hypothetical protein LOC100265538	-	3e-24	At2g28390	SAND family protein	C.G.	S.X.	Please select
0.03	8e-1	34	Zea mays	Zm.5117.1.A1_at	AI600920	hypothetical protein LOC100276666	-	2e+0	At4g36420	ribosomal protein L12 family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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