Gene omics information

Query gene ID	Gma.4443.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	86.1	Gma.4443.1.S1_at	AW348382	-	-	6e+0	At5g23903	unknown protein	S.X.	H.G.	Please select
0.83	92.5	Gma.1413.1.S1_a_at	AW734487	-	-	8e-37	At1g15880	GOS11 (golgi snare 11)	S.X.	H.G.	Please select
0.73	88.9	Gma.3852.1.S1_at	CD399104	-	-	8e-75	At5g27840	TOPP8	S.X.	H.G.	Please select
0.67	86.1	Gma.8221.1.A1_at	BU549413	-	-	1e-9	At3g45040	phosphatidate cytidylyltransferase family protein	S.X.	H.G.	Please select
0.57	78.8	GmaAffx.86728.1.S1_at	BI967919	-	-	3e-7	At4g20380	zinc finger protein (LSD1)	S.X.	H.G.	Please select
0.53	74.2	Gma.10215.1.S1_a_at	AY263347.1	protein kinase Pti1	-	1e-73	At3g59350	serine/threonine protein kinase, putative	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
263.4	100.0	GSM308559	Mature Soybean (Glycine max) pollen grains Replicate 2	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
248.6	100.0	GSM308560	Mature Soybean (Glycine max) pollen grains Replicate 3	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
184.0	100.0	GSM308556	Mature Soybean (Glycine max) pollen grains replicate 1	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
3.0	95.6	GSM209589	resistant_48hours_rep2	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
3.0	95.6	GSM209588	susceptible_24hours_rep2	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
2.7	94.8	GSM209597	susceptible_24hours_rep3	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
2.3	93.3	GSM209587	resistant_24hours_rep2	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
2.3	93.3	GSM292410	14_1254.1G.R161P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.1	92.3	GSM294061	19_2292.2G.R251P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.1	92.3	GSM293324	14_C074.1Q.V7Q1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.75	0	833	Gma.555.1.S1_at	AW734193	-	-	2e+0	At4g14550	IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14)	C.G.	S.X.	Please select
0.32	1e-72	274	GmaAffx.15583.1.S1_at	CA820645	-	-	3e+0	At5g23903	unknown protein	C.G.	S.X.	Please select
0.15	1e-35	151	GmaAffx.45359.2.S1_at	BQ453165	-	-	1e-60	At4g28540	CKL6 (CASEIN KINASE I-LIKE 6)	C.G.	S.X.	Please select
0.14	2e-28	127	GmaAffx.93282.1.S1_at	CF809007	-	-	1e+0	At5g65610	unknown protein	C.G.	S.X.	Please select
0.20	3e-12	73	GmaAffx.45359.1.S1_at	CA852617	-	-	2e+0	At5g17010	sugar transporter family protein	C.G.	S.X.	Please select
0.03	6e-1	36	HgAffx.3699.1.S1_s_at	AF473827.1	-	-	1e+0	At2g39530	integral membrane protein, putative	C.G.	S.X.	Please select
0.03	6e-1	36	HgAffx.3699.1.S1_at	AF473827.1	-	-	1e+0	At2g39530	integral membrane protein, putative	C.G.	S.X.	Please select
0.01	2e+0	34	PsAffx.C84000032_at	PsAffx.C84000032	-	-	7e+0	At5g41440	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.01	2e+0	34	PsAffx.C49000011_at	PsAffx.C49000011	-	-	9e-2	At3g32160	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	6e+0	32	Arabidopsis thaliana	At5g23903	6240215	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	3e+0	32	Hordeum vulgare	HS17H03r_at	HS17H03r	-	-	2e+0	At2g32670	ATVAMP725	C.G.	S.X.	Please select
0.03	8e-1	36	Oryza sativa	Os01g0589500	AB110176.1	-	-	1e-1	At3g12130	KH domain-containing protein / zinc finger (CCCH type) family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.06	1e-1	38	Populus trichocarpa	PtpAffx.136792.1.S1_at	CK096969	hypothetical protein	-	2e-6	At4g28540	CKL6 (CASEIN KINASE I-LIKE 6)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	7e+0	32	Triticum aestivum	TaAffx.58569.1.S1_at	CA618464	-	-	3e+0	At3g22360	AOX1B	C.G.	S.X.	Please select
0.04	8e-3	40	Vitis vinifera	1614339_at	CF208988	hypothetical protein LOC100242639	-	1e+0	At1g27300	unknown protein	C.G.	S.X.	Please select
0.03	4e-2	38	Zea mays	Zm.4088.1.A1_at	AI834541	-	-	3e+0	At2g23970	defense-related protein, putative	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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