CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Gma.4424.1.S1_at

Gene name

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 86.1 Gma.4424.1.S1_at BG237912 - - 2e-40 At1g11840 ATGLX1 (GLYOXALASE I HOMOLOG) S.X. H.G.
0.27 35.7 Gma.6420.1.S1_at AW350562 - - 5e-17 At3g49720 unknown protein S.X. H.G.
0.14 17.5 Gma.10919.1.S1_s_at AW348585 - - 1e-10 At5g53560 CB5-E (CYTOCHROME B5 ISOFORM E) S.X. H.G.
0.07 10.2 Gma.16114.1.S1_at BE821099 - - 4e-22 At1g10950 endomembrane protein 70, putative S.X. H.G.
0.02 4.5 GmaAffx.48283.1.S1_at BG046994 - - 1e+0 At1g03040 basic helix-loop-helix (bHLH) family protein S.X. H.G.
0.02 4.5 Gma.6079.1.S1_x_at CD397253 - - 2e-4 At1g06110 SKIP16 (SKP1/ASK-interacting protein 16) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
8.6 99.1 GSM258498 Soybean shoot apical meristem, 2 short-day treatment GSE10251 Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
7.7 99.0 GSM258502 Vegetative shoot apical meristem, replicate B GSE10251 Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
6.9 98.8 GSM237070 Soy_non-shoot apical meristem2 GSE10607 Genome-wide analysis of gene expression in the soybean shoot apical meristem
6.9 98.8 GSM258503 Soybean shoot apical meristem, 2 short-day replicate B GSE10251 Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
6.6 98.7 GSM258497 Soybean Shoot Apical Meristem, 1 short-day treatment GSE10251 Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
6.0 98.5 GSM237068 Soy_shoot apical meristem GSE10607 Genome-wide analysis of gene expression in the soybean shoot apical meristem
5.9 98.5 GSM258504 Soybean shoot apical meristem, 4 short-day replicate B GSE10251 Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
5.6 98.3 GSM236910 Soybean_nonapicalmeristem GSE10607 Genome-wide analysis of gene expression in the soybean shoot apical meristem
5.3 98.2 GSM267287 Axillary meristem from 10-day-old soybean seedlings GSE10607 Genome-wide analysis of gene expression in the soybean shoot apical meristem
5.2 98.1 GSM244871 31_SLO.I3U2.CEL, Experimental replicate 2 GSE9687 Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.55 0 745 Gma.5683.2.S1_at CA935387 - - 7e-75 At1g11840 ATGLX1 (GLYOXALASE I HOMOLOG) C.G. S.X.
0.26 7e-100 365 GmaAffx.8889.1.S1_s_at BG509533 - - 6e-1 At4g18590 - C.G. S.X.
0.02 2e-1 38 Gma.5057.1.S1_a_at AW310849 - - 2e-25 At5g13440 ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putative C.G. S.X.
0.03 2e-1 38 Gma.5057.3.A1_at CA935008 - - 7e-14 At5g13430 ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putative C.G. S.X.
0.02 2e-1 38 Gma.5057.1.S1_at AW310849 - - 2e-25 At5g13440 ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putative C.G. S.X.
0.01 3e+0 34 PsAffx.C178000022_at PsAffx.C178000022 - - 2e+0 At3g01740 - C.G. S.X.
0.03 3e+0 34 HgAffx.16722.1.S1_at CB279634 - - 3e+0 At3g24500 MBF1C (MULTIPROTEIN BRIDGING FACTOR 1C) C.G. S.X.
0.01 3e+0 34 GmaAffx.73899.1.S1_at BU550328 - - 2e-4 At3g13350 high mobility group (HMG1/2) family protein / ARID/BRIGHT DNA-binding domain-containing protein C.G. S.X.
0.02 3e+0 34 Gma.3409.1.S1_at CA936258 - - 1e-1 At4g38810 calcium-binding EF hand family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.43 2e-40 167 Arabidopsis thaliana At1g11840 837731 ATGLX1 (GLYOXALASE I HOMOLOG) Encodes a glyoxalase I homolog ATGLX1. - - - C.G. S.X.
0.17 2e-8 59 Hordeum vulgare Contig1934_at Contig1934 - - 7e-13 At1g11840 ATGLX1 (GLYOXALASE I HOMOLOG) C.G. S.X.
0.17 5e-12 73 Oryza sativa Os08g0191700 AK066092.1 - Glyoxalase I family protein 2e-13 At1g11840 ATGLX1 (GLYOXALASE I HOMOLOG) C.G. S.X.
0.47 5e-45 182 Populus trichocarpa Ptp.2633.1.S1_at CK095904 hypothetical protein - 2e-75 At1g11840 ATGLX1 (GLYOXALASE I HOMOLOG) C.G. S.X.
0.16 4e-11 69 Triticum aestivum Ta.1842.2.S1_at BJ321503 - - 5e-14 At1g11840 ATGLX1 (GLYOXALASE I HOMOLOG) C.G. S.X.
0.52 4e-76 284 Vitis vinifera 1609781_s_at CB341681 hypothetical protein LOC100257313 - 1e-66 At1g11840 ATGLX1 (GLYOXALASE I HOMOLOG) C.G. S.X.
0.09 7e-17 87 Zea mays Zm.17590.1.A1_at CK144918 hypothetical protein LOC100191237 - 3e-46 At1g67280 lactoylglutathione lyase, putative / glyoxalase I, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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