Gene omics information

Query gene ID	Gma.4068.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.61	81.8	Gma.4068.1.S1_at	CD399501	-	-	7e-26	At3g60800	zinc finger (DHHC type) family protein	S.X.	H.G.	Please select
0.57	78.8	Gma.6570.1.S1_s_at	AW350797	-	-	6e-48	At1g30620	MUR4 (MURUS 4)	S.X.	H.G.	Please select
0.50	71.7	Gma.3568.1.S1_x_at	BI941735	-	-	1e-54	At5g10260	AtRABH1e (Arabidopsis Rab GTPase homolog H1e)	S.X.	H.G.	Please select
0.38	53.3	Gma.6454.1.S1_at	BM271508	-	-	2e-90	At5g25265	unknown protein	S.X.	H.G.	Please select
0.29	39.0	Gma.16294.1.S1_at	CD413154	-	-	1e-44	At1g69340	appr-1-p processing enzyme family protein	S.X.	H.G.	Please select
0.27	35.7	Gma.7015.1.S1_at	CD402211	-	-	3e-57	At2g42500	PP2A-4	S.X.	H.G.	Please select
0.22	28.1	Gma.6024.1.S1_s_at	CD397288	-	-	5e-1	At5g41290	receptor-like protein kinase-related	S.X.	H.G.	Please select
0.15	18.7	GmaAffx.92473.1.S1_s_at	CF809138	-	-	1e+0	At3g01360	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
6.3	98.6	GSM294218	69_3140.2H.R9H3P_new, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.9	98.5	GSM294206	58_2338.2H.R240P_new, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.0	98.0	GSM294132	86_3112.2G.R9G1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.7	97.8	GSM293459	47_1596.1R.R009P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.6	97.7	GSM292890	65_C202.1L.R9L1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.6	97.7	GSM294236	85_3128.2H.SLH1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.5	97.7	GSM294244	92_2340.2H.R202P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.3	97.5	GSM294571	41_3212.2L.R9L3P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.2	97.4	GSM293419	10_C108.1R.R9R3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.2	97.4	GSM294237	86_3142.2H.SLH3P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.41	1e-111	404	Gma.3406.1.S1_at	BG406559	-	-	1e-22	At3g60800	zinc finger (DHHC type) family protein	C.G.	S.X.	Please select
0.19	9e-26	119	Gma.3406.3.S1_at	AI794714	-	-	1e-12	At3g60800	zinc finger (DHHC type) family protein	C.G.	S.X.	Please select
0.04	7e-2	40	Gma.8806.1.S1_at	BI970312	-	-	2e-10	At4g00840	zinc ion binding	C.G.	S.X.	Please select
0.00	4e+0	34	PsAffx.C39000093_at	PsAffx.C39000093	-	-	1e-3	At5g41620	-	C.G.	S.X.	Please select
0.01	4e+0	34	PsAffx.C16000065_at	PsAffx.C16000065	-	-	7e-1	At1g06320	unknown protein	C.G.	S.X.	Please select
0.02	4e+0	34	HgAffx.23116.1.S1_at	CB825366	-	-	2e+1	At5g50500	unknown protein	C.G.	S.X.	Please select
0.01	4e+0	34	GmaAffx.80323.1.S1_at	BI471150	-	-	1e-38	At2g39670	radical SAM domain-containing protein	C.G.	S.X.	Please select
0.02	4e+0	34	GmaAffx.42111.1.A1_at	BQ080878	-	-	2e-1	At3g55280	RPL23AB (RIBOSOMAL PROTEIN L23AB)	C.G.	S.X.	Please select
0.02	4e+0	34	Gma.17594.1.A1_at	AW310993	-	-	2e-13	At1g64660	ATMGL (ARABIDOPSIS THALIANA METHIONINE GAMMA-LYASE)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.33	7e-26	119	Arabidopsis thaliana	At3g60800	825251	zinc finger (DHHC type) family protein	F:zinc ion binding;P:biological_process unknown;C:unknown;MOFP	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.10	1e-7	57	Hordeum vulgare	Contig9709_s_at	Contig9709	-	-	2e-7	At3g60800	zinc finger (DHHC type) family protein	C.G.	S.X.	Please select
0.17	7e-15	83	Oryza sativa	Os03g0804300	AK067295.1	-	Huntingtin-interacting protein 14	6e-14	At3g60800	zinc finger (DHHC type) family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.51	1e-40	169	Populus trichocarpa	PtpAffx.211466.1.S1_at	pmrna22473	hypothetical protein	-	1e-41	At3g60800	zinc finger (DHHC type) family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.09	2e-4	48	Triticum aestivum	Ta.16822.1.S1_at	CK196796	-	-	3e-12	At3g60800	zinc finger (DHHC type) family protein	C.G.	S.X.	Please select
0.02	9e-1	34	Vitis vinifera	1612943_at	CB346200	hypothetical protein LOC100250133	-	5e-1	At4g30480	tetratricopeptide repeat (TPR)-containing protein	C.G.	S.X.	Please select
0.13	2e-9	63	Zea mays	Zm.17585.1.S1_at	AI467721	palmitoyltransferase ZDHHC20	-	1e-11	At4g22750	zinc finger (DHHC type) family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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