Gene omics information

Query gene ID	Gma.3807.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.60	80.7	Gma.3807.1.S1_at	BE822205	-	-	8e-13	At1g36060	AP2 domain-containing transcription factor, putative	S.X.	H.G.	Please select
0.55	76.3	Gma.1187.1.S1_at	AW350683	-	-	9e-9	At1g36060	AP2 domain-containing transcription factor, putative	S.X.	H.G.	Please select
0.40	57.1	Gma.4463.1.S1_at	CD390833	-	-	3e-24	At1g53170	ERF8	S.X.	H.G.	Please select
0.29	39.0	Gma.6426.1.S1_at	CA800565	-	-	7e-19	At3g15210	ERF4 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4)	S.X.	H.G.	Please select
0.07	10.2	GmaAffx.43781.1.A1_at	AW350514	-	-	1e-11	At5g01710	-	S.X.	H.G.	Please select
0.06	9.0	GmaAffx.83794.1.S1_at	BU927215	-	-	9e-1	At4g02541	unknown protein	S.X.	H.G.	Please select
0.01	3.4	Gma.13227.1.A1_at	BE610302	-	-	1e+0	At4g18620	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
10.9	99.4	GSM292230	28_1045.1B.R025L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.7	99.4	GSM209596	resistant_24hours_rep3	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
10.2	99.3	GSM292227	22_1043.1B.R024U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.8	99.3	GSM209597	susceptible_24hours_rep3	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
9.3	99.2	GSM292228	23_1052.1B.R029P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.4	98.9	GSM292479	77_1248.1G.R154P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.2	98.9	GSM292313	60_1170.1E.R105P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.8	98.7	GSM292271	16_1192.1E.R116P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.8	98.7	GSM292296	42_C076.1E.R9E1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.6	98.7	GSM292220	14_C031.1B.V7B3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.58	5e-138	492	Gma.1187.1.S1_at	AW350683	-	-	9e-9	At1g36060	AP2 domain-containing transcription factor, putative	C.G.	S.X.	Please select
0.13	2e-51	204	GmaAffx.24129.1.S1_s_at	BQ610397	-	-	2e+1	At5g28640	AN3 (ANGUSTIFOLIA 3)	C.G.	S.X.	Please select
0.16	1e-46	188	Gma.16611.1.S1_at	AW348526	Dehydration responsive element-binding protein 3 (DREB3)	-	6e-11	At1g22190	AP2 domain-containing transcription factor, putative	C.G.	S.X.	Please select
0.19	4e-46	186	Gma.16611.2.S1_s_at	BG237812	-	-	4e-12	At1g78080	RAP2.4 (related to AP2 4)	C.G.	S.X.	Please select
0.03	4e-9	63	Gma.6426.1.S1_at	CA800565	-	-	7e-19	At3g15210	ERF4 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4)	C.G.	S.X.	Please select
0.09	2e-8	61	Gma.8896.1.S1_at	BQ252812	-	-	2e-3	At2g22200	AP2 domain-containing transcription factor	C.G.	S.X.	Please select
0.04	7e-8	59	GmaAffx.57845.1.S1_at	BU545815	-	-	7e-25	At1g64380	AP2 domain-containing transcription factor, putative	C.G.	S.X.	Please select
0.03	3e-7	57	Gma.6924.1.S1_at	CD395228	-	-	4e-2	At5g44210	ERF9 (ERF DOMAIN PROTEIN 9)	C.G.	S.X.	Please select
0.05	1e-6	56	GmaAffx.60303.1.S1_at	BM886518	-	-	7e-11	At1g22985	AP2 domain-containing transcription factor, putative	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.10	8e-13	75	Arabidopsis thaliana	At1g36060	840510	AP2 domain-containing transcription factor, putative	encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.08	2e-5	50	Hordeum vulgare	Contig4317_at	Contig4317	-	-	2e-1	At1g36060	AP2 domain-containing transcription factor, putative	C.G.	S.X.	Please select
0.11	2e-18	95	Oryza sativa	Os03g0191900	9631.m00866	-	AP2 domain family transcription factor homolog(AP2 domain transcription factor) (ABI4:abscisicacid-insensitive 4 ) (ABI4)	4e-2	At1g71130	AP2 domain-containing transcription factor, putative	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.11	4e-3	44	Populus trichocarpa	PtpAffx.21486.2.S1_a_at	CV254073	-	-	8e-27	At4g39780	AP2 domain-containing transcription factor, putative	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.10	2e-13	77	Triticum aestivum	TaAffx.77891.1.S1_at	CA741204	-	-	3e-4	At2g22200	AP2 domain-containing transcription factor	C.G.	S.X.	Please select
0.03	5e-2	38	Vitis vinifera	1609683_at	CF604955	hypothetical protein LOC100249982	-	2e-11	At2g47520	AP2 domain-containing transcription factor, putative	C.G.	S.X.	Please select
0.07	3e-10	65	Zea mays	Zm.10842.1.S1_a_at	AF493800.1	DRE binding factor 1	-	1e-4	At2g22200	AP2 domain-containing transcription factor	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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