CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Gma.374.2.S1_at

Gene name

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.61 81.8 Gma.374.2.S1_at AI494929 - - 1e+0 At2g47140 short-chain dehydrogenase/reductase (SDR) family protein S.X. H.G.
0.60 80.7 Gma.4843.1.A1_at BI969381 - - 1e+1 At5g60430 antiporter/ drug transporter S.X. H.G.
0.57 78.8 Gma.6414.1.S1_at BE659785 - - 5e-3 At5g57770 - S.X. H.G.
0.53 74.2 Gma.6494.1.S1_at BI784551 - - 3e-41 At2g12646 - S.X. H.G.
0.50 71.7 GmaAffx.84632.1.S1_at AW119808 - - 7e-8 At5g57770 - S.X. H.G.
0.44 63.3 Gma.374.1.A1_at AW309650 - - 1e-3 At3g29250 copper ion binding / oxidoreductase S.X. H.G.
0.33 46.1 Gma.405.1.A1_at AI443411 - - 3e-3 At5g12940 leucine-rich repeat family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
13.0 99.5 GSM293019 24_1082.1N.R048P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.7 99.1 GSM294469 36_2484.2K.R271P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.8 99.0 GSM294022 73_2244.2F.R060P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.7 99.0 GSM293897 47_2214.2E.R168P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.6 98.9 GSM293288 71_1156.1P.R097P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.5 98.9 GSM293536 51_2047.2A.R306L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.3 98.9 GSM293746 79_2118.2C.R248P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.1 98.8 GSM293413 95_1566.1Q.R153P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.9 98.8 GSM293512 2_2035.2A.R165L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.5 98.7 GSM293799 42_2160.2D.R076P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 4e-1 36 GmaAffx.10747.1.S1_at BU926913 - - 2e+0 At3g29375 XH domain-containing protein C.G. S.X.
0.04 4e-1 36 Gma.14146.1.A1_at CD416211 - - 1e+1 Atmg00290 - C.G. S.X.
0.01 2e+0 34 PsAffx.C7000195_at PsAffx.C7000195 - - 1e+0 At4g14350 protein kinase family protein C.G. S.X.
0.02 2e+0 34 PsAffx.C348000002_at PsAffx.C348000002 - - 7e+0 At2g39790 mitochondrial glycoprotein family protein / MAM33 family protein C.G. S.X.
0.01 2e+0 34 PsAffx.C2000188_at PsAffx.C2000188 - - 5e-1 At1g08480 unknown protein C.G. S.X.
0.03 2e+0 34 GmaAffx.64472.1.S1_at BM178003 - - 3e+0 At4g13615 four F5 protein-related / 4F5 protein-related C.G. S.X.
0.02 2e+0 34 Gma.2276.1.S1_at BI468832 - - 1e-8 At4g04880 adenosine/AMP deaminase family protein C.G. S.X.
0.01 7e+0 32 PsAffx.C5000220_s_at PsAffx.C5000220 - - 3e-10 At3g53610 ATRAB8 C.G. S.X.
0.01 7e+0 32 PsAffx.C22000094_at PsAffx.C22000094 - - 3e+0 At2g16030 methyltransferase C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 1e+0 34 Arabidopsis thaliana At2g47140 819327 short-chain dehydrogenase/reductase (SDR) family protein F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPAV - - - C.G. S.X.
0.03 9e+0 30 Hordeum vulgare Contig20334_at Contig20334 - - 4e+0 At1g09760 U2A' (U2 small nuclear ribonucleoprotein A) C.G. S.X.
0.02 2e+0 34 Oryza sativa OsAffx.17230.1.S1_at - - - 0 C.G. S.X.
0.19 5e-13 75 Populus trichocarpa PtpAffx.121004.1.A1_at CV257398 hypothetical protein - 6e-3 At2g47140 short-chain dehydrogenase/reductase (SDR) family protein C.G. S.X.
0.03 5e+0 32 Triticum aestivum TaAffx.110903.1.S1_at CA651960 - - 1e+0 At2g34850 MEE25 (maternal effect embryo arrest 25) C.G. S.X.
0.03 1e+0 32 Vitis vinifera 1607800_at CB972521 hypothetical protein LOC100255033 - 1e+0 At2g22200 AP2 domain-containing transcription factor C.G. S.X.
0.03 5e-1 34 Zea mays Zm.3781.1.S1_at CD447284 syntaxin 132 - 3e-4 At1g11250 SYP125 (SYNTAXIN OF PLANTS 125) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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