Gene omics information

Query gene ID	Gma.3639.1.S1_at
Gene name	syringolide-induced protein B15-3-5
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.71	87.8	Gma.3639.1.S1_at	AB083030.1	syringolide-induced protein B15-3-5	-	1e-4	At2g38600	acid phosphatase class B family protein	S.X.	H.G.	Please select
0.50	71.7	GmaAffx.36250.1.S1_s_at	BG551078	-	-	2e-1	At5g62520	SRO5 (SIMILAR TO RCD ONE 5)	S.X.	H.G.	Please select
0.50	71.7	GmaAffx.93046.1.S1_at	CF808771	-	-	3e-1	At5g62520	SRO5 (SIMILAR TO RCD ONE 5)	S.X.	H.G.	Please select
0.50	71.7	GmaAffx.74525.2.S1_at	BI892728	WRKY6	-	5e-1	At5g64810	WRKY51	S.X.	H.G.	Please select
0.44	63.3	Gma.4470.1.S1_s_at	AW156251	-	-	2e+0	At5g41401	unknown protein	S.X.	H.G.	Please select
0.19	23.7	GmaAffx.46686.1.S1_at	BQ081277	-	-	1e-5	At1g07570	APK1A	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
9.7	99.3	GSM294238	87_2337.2H.R240L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.5	99.2	GSM293887	38_2229.2E.R022L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.4	99.2	GSM294044	93_2261.2F.R205L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.6	98.9	GSM292391	67_1229.1F.R141L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.6	98.9	GSM292436	38_1269.1G.R171L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.3	98.9	GSM292842	21_1443.1L.R271L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.3	98.9	GSM294687	57_2615.2M.R072L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.2	98.9	GSM293925	72_2195.2E.R239L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.1	98.8	GSM294453	21_2515.2K.R005L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.8	98.7	GSM292408	12_1265.1G.R168L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.29	5e-48	192	GmaAffx.55338.1.S1_at	BI470489	-	-	5e-6	At2g38600	acid phosphatase class B family protein	C.G.	S.X.	Please select
0.19	1e-17	91	Gma.447.1.S1_at	BI943978	-	-	6e-14	At2g38600	acid phosphatase class B family protein	C.G.	S.X.	Please select
0.02	7e-1	36	HgAffx.13205.1.S1_at	AF273733.2	-	-	7e+0	At5g56940	ribosomal protein S16 family protein	C.G.	S.X.	Please select
0.02	7e-1	36	GmaAffx.38616.1.S1_at	CD486925	-	-	4e-7	At1g25440	zinc finger (B-box type) family protein	C.G.	S.X.	Please select
0.02	3e+0	34	PsAffx.C95000013_at	PsAffx.C95000013	-	-	2e-1	At1g24030	protein kinase family protein	C.G.	S.X.	Please select
0.01	3e+0	34	PsAffx.C89000018_at	PsAffx.C89000018	-	-	5e+0	At5g36960	unknown protein	C.G.	S.X.	Please select
0.01	3e+0	34	PsAffx.C115000033_at	PsAffx.C115000033	-	-	3e-2	At1g22110	structural constituent of ribosome	C.G.	S.X.	Please select
0.03	3e+0	34	GmaAffx.9926.2.S1_at	BF597587	-	-	6e-2	At2g28800	ALB3 (ALBINO 3)	C.G.	S.X.	Please select
0.02	3e+0	34	GmaAffx.82770.1.S1_at	BU550361	-	-	3e-5	At5g04950	NAS1 (NICOTIANAMINE SYNTHASE 1)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	1e-4	48	Arabidopsis thaliana	At2g38600	818442	acid phosphatase class B family protein	F:acid phosphatase activity;P:biological_process unknown;C:endomembrane system;PBO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	9e-1	34	Hordeum vulgare	HB27O05r_at	HB27O05r	-	-	9e-1	At4g21216	unknown protein	C.G.	S.X.	Please select
0.04	1e-6	56	Oryza sativa	Os07g0681200	AK064745.1	-	Acid phosphatase (Class B) family protein	4e-1	At1g53620	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.16	1e-14	81	Populus trichocarpa	Ptp.3415.1.S1_at	DN492670	hypothetical protein	-	6e-7	At2g38600	acid phosphatase class B family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	2e+0	34	Triticum aestivum	TaAffx.29849.1.S1_at	CA634144	Fasciclin-like protein FLA25	-	3e+0	At1g77765	unknown protein	C.G.	S.X.	Please select
0.03	1e-1	36	Vitis vinifera	1611818_at	CB006301	hypothetical protein LOC100264454	-	9e-9	At5g51260	acid phosphatase, putative	C.G.	S.X.	Please select
0.03	3e+0	32	Zea mays	Zm.7012.9.A1_at	BE123180	-	-	3e+0	At2g27510	ATFD3 (ferredoxin 3)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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