Gene omics information

Query gene ID	Gma.3535.2.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.83	92.5	Gma.3535.2.S1_at	BG047223	-	-	2e+0	At2g21320	zinc finger (B-box type) family protein	S.X.	H.G.	Please select
0.91	98.6	Gma.3535.1.S1_x_at	CD392670	-	-	2e+0	At5g24650	mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein	S.X.	H.G.	Please select
0.67	86.1	Gma.3535.1.S1_s_at	CD392670	-	-	2e+0	At5g24650	mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein	S.X.	H.G.	Please select
0.56	78.2	GmaAffx.90193.1.S1_s_at	CF805918	-	-	8e-21	At4g31170	protein kinase family protein	S.X.	H.G.	Please select
0.31	42.2	Gma.1916.1.S1_at	AW185983	-	-	1e-35	At3g47810	MAG1 (MAIGO 1)	S.X.	H.G.	Please select
0.20	25.1	Gma.6207.1.S1_s_at	CF922738	-	-	7e-16	At4g19640	ARA7	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
11.8	99.4	GSM292923	95_1465.1L.R283L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.4	99.2	GSM147938	Laser capture microdissected (LCM) suspensor at the globular stage, biological replicate 3	GSE6414	Expression data from soybean seed compartments with embryos at the globular stage
8.9	99.2	GSM294431	86_2456.2J.R220P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.7	99.0	GSM294353	15_2459.2J.R291L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.3	98.9	GSM308556	Mature Soybean (Glycine max) pollen grains replicate 1	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
6.9	98.8	GSM294369	2_2439.2J.R135L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.4	98.6	GSM294381	40_2443.2J.R083L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.4	98.6	GSM292233	35_C030.1B.R9B2P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.4	98.6	GSM294430	85_2455.2J.R220U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.9	98.5	GSM293641	68_2065.2B.R129U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.93	0	1229	Gma.3535.2.S1_a_at	BG047223	-	-	2e+0	At2g21320	zinc finger (B-box type) family protein	C.G.	S.X.	Please select
0.38	1e-140	500	Gma.3535.1.S1_x_at	CD392670	-	-	2e+0	At5g24650	mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein	C.G.	S.X.	Please select
0.38	1e-140	500	Gma.3535.1.S1_s_at	CD392670	-	-	2e+0	At5g24650	mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein	C.G.	S.X.	Please select
0.02	6e-1	36	PsAffx.CL84Contig1_at	PsAffx.CL84Contig1	-	-	1e+1	At5g67490	unknown protein	C.G.	S.X.	Please select
0.02	3e+0	34	GmaAffx.9859.1.S1_at	BU761211	-	-	9e-12	At2g36310	URH1 (URIDINE-RIBOHYDROLASE 1)	C.G.	S.X.	Please select
0.03	3e+0	34	GmaAffx.65026.1.S1_at	BQ612000	-	-	2e+0	At5g34881	unknown protein	C.G.	S.X.	Please select
0.03	3e+0	34	GmaAffx.39590.1.S1_at	AW780487	-	-	3e+0	At1g09260	DNAJ heat shock N-terminal domain-containing protein	C.G.	S.X.	Please select
0.02	3e+0	34	Gma.3241.1.S1_a_at	CD408286	-	-	4e-5	At1g72610	GER1 (GERMIN-LIKE PROTEIN 1)	C.G.	S.X.	Please select
0.02	3e+0	34	Gma.3241.1.S1_at	CD408286	-	-	4e-5	At1g72610	GER1 (GERMIN-LIKE PROTEIN 1)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	2e+0	34	Arabidopsis thaliana	At2g21320	816671	zinc finger (B-box type) family protein	F:transcription factor activity, zinc ion binding;P:regulation of transcription;C:endomembrane system, intracellular;POM	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	4e+0	32	Hordeum vulgare	rbags1e22_s_at	rbags1e22	-	-	3e-1	At3g56360	unknown protein	C.G.	S.X.	Please select
0.01	9e-1	36	Oryza sativa	Os08g0424500	AK071221.1	-	Betaine-aldehyde dehydrogenase (EC 1.2.1.8) (BADH)	2e-17	At1g74920	ALDH10A8	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.27	2e-32	141	Populus trichocarpa	PtpAffx.16969.1.S1_at	CV271321	hypothetical protein	-	1e-1	At5g24650	mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.07	3e-5	50	Triticum aestivum	TaAffx.58569.1.S1_at	CA618464	-	-	3e+0	At3g22360	AOX1B	C.G.	S.X.	Please select
0.17	2e-25	115	Vitis vinifera	1611243_at	CF206227.1	-	-	3e-14	At5g24650	mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein	C.G.	S.X.	Please select
0.03	1e-5	50	Zea mays	Zm.3616.1.A1_at	BM380107	hypothetical protein LOC100193860	-	4e-5	At5g24650	mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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