Gene omics information

Query gene ID	Gma.3535.1.S1_x_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.6	Gma.3535.1.S1_x_at	CD392670	-	-	2e+0	At5g24650	mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein	S.X.	H.G.	Please select
0.83	92.5	Gma.3535.2.S1_at	BG047223	-	-	2e+0	At2g21320	zinc finger (B-box type) family protein	S.X.	H.G.	Please select
0.67	86.1	Gma.3535.1.S1_s_at	CD392670	-	-	2e+0	At5g24650	mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein	S.X.	H.G.	Please select
0.56	78.2	GmaAffx.90193.1.S1_s_at	CF805918	-	-	8e-21	At4g31170	protein kinase family protein	S.X.	H.G.	Please select
0.31	42.2	Gma.1916.1.S1_at	AW185983	-	-	1e-35	At3g47810	MAG1 (MAIGO 1)	S.X.	H.G.	Please select
0.20	25.1	Gma.6207.1.S1_s_at	CF922738	-	-	7e-16	At4g19640	ARA7	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
2.8	95.1	GSM209594	resistant_12hours_rep3	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
2.7	94.8	GSM293416	98_1565.1Q.R153U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.7	94.8	GSM209595	susceptible_12hours_rep3	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
2.6	94.5	GSM209585	resistant_12hours_rep2	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
2.3	93.3	GSM171697	32_Z.B.I.3, Experimental replicate Z	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
2.3	93.3	GSM293401	84_C085.1Q.SLQ3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.3	93.3	GSM209596	resistant_24hours_rep3	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
2.1	92.3	GSM292186	47-1025.1A.R014U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.1	92.3	GSM294641	15_2605.2M.R287L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.1	92.3	GSM209598	resistant_48hours_rep3	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.91	0	1748	Gma.3535.1.S1_s_at	CD392670	-	-	2e+0	At5g24650	mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein	C.G.	S.X.	Please select
0.38	2e-140	500	Gma.3535.2.S1_a_at	BG047223	-	-	2e+0	At2g21320	zinc finger (B-box type) family protein	C.G.	S.X.	Please select
0.38	2e-140	500	Gma.3535.2.S1_at	BG047223	-	-	2e+0	At2g21320	zinc finger (B-box type) family protein	C.G.	S.X.	Please select
0.01	8e-1	36	PsAffx.C68000058_s_at	PsAffx.C68000058	-	-	4e+0	At5g09570	-	C.G.	S.X.	Please select
0.02	8e-1	36	GmaAffx.53026.2.A1_at	BE658325	-	-	6e-1	At1g06320	unknown protein	C.G.	S.X.	Please select
0.03	8e-1	36	Gma.8505.1.A1_at	AF314554.1	NBS-type putative resistance protein	-	5e-1	At1g05450	protease inhibitor/seed storage/lipid transfer protein (LTP)-related	C.G.	S.X.	Please select
0.03	8e-1	36	Gma.8505.1.S1_at	AF314554.1	NBS-type putative resistance protein	-	5e-1	At1g05450	protease inhibitor/seed storage/lipid transfer protein (LTP)-related	C.G.	S.X.	Please select
0.03	8e-1	36	Gma.8505.1.S1_x_at	AF314554.1	NBS-type putative resistance protein	-	5e-1	At1g05450	protease inhibitor/seed storage/lipid transfer protein (LTP)-related	C.G.	S.X.	Please select
0.02	3e+0	34	PsAffx.CL439Contig1_at	PsAffx.CL439Contig1	-	-	2e-1	At1g02710	glycine-rich protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.10	2e+0	34	Arabidopsis thaliana	At5g24650	832536	mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein	F:protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity;P:protein transport;C:chloroplast, plasma membrane, vacuole, mitochondrial inner membrane presequence translocase complex, chloroplast envelope;FPMO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	1e+0	34	Hordeum vulgare	EBro03_SQ003_J21_at	EBro03_SQ003_J21	-	-	8e-1	At5g04386	unknown protein	C.G.	S.X.	Please select
0.03	7e-2	40	Oryza sativa	Os02g0526500	AK067722.1	-	Hypothetical protein	3e-1	At2g36080	DNA-binding protein, putative	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.40	9e-50	198	Populus trichocarpa	PtpAffx.16969.1.S1_at	CV271321	hypothetical protein	-	1e-1	At5g24650	mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.06	2e-4	48	Triticum aestivum	TaAffx.58569.1.S1_at	CA618464	-	-	3e+0	At3g22360	AOX1B	C.G.	S.X.	Please select
0.21	4e-33	141	Vitis vinifera	1615963_s_at	BQ797256	hypothetical protein LOC100267522	-	4e-14	At5g24650	mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein	C.G.	S.X.	Please select
0.03	7e-5	48	Zea mays	Zm.3616.1.A1_at	BM380107	hypothetical protein LOC100193860	-	4e-5	At5g24650	mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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