Gene omics information

Query gene ID	Gma.3326.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.84	92.6	Gma.3326.1.S1_at	BQ298667	-	-	3e+0	At2g27320	unknown protein	S.X.	H.G.	Please select
0.39	54.5	GmaAffx.93464.1.S1_x_at	CF806554	-	-	4e-12	At1g14330	kelch repeat-containing F-box family protein	S.X.	H.G.	Please select
0.38	53.3	GmaAffx.90071.1.S1_at	CF805796	-	-	3e+0	At1g26921	unknown protein	S.X.	H.G.	Please select
0.35	48.6	Gma.4698.1.S1_at	AW309918	-	-	5e-7	At4g18430	AtRABA1e (Arabidopsis Rab GTPase homolog A1e)	S.X.	H.G.	Please select
0.31	42.2	Gma.13468.1.S1_at	CD398485	-	-	1e+0	At1g79760	DTA4 (DOWNSTREAM TARGET OF AGL15-4)	S.X.	H.G.	Please select
0.30	40.4	GmaAffx.6438.1.S1_at	BM176963	WRKY19 protein	-	1e+1	At5g48595	-	S.X.	H.G.	Please select
0.29	39.0	Gma.11486.1.A1_at	BG511169	-	-	3e+0	At2g44400	DC1 domain-containing protein	S.X.	H.G.	Please select
0.28	39.0	Gma.4449.1.S1_at	BI967193	-	-	2e+0	At5g09805	IDL3 (INFLORESCENCE DEFICIENT IN ABSCISSION (IDA)-LIKE 3)	S.X.	H.G.	Please select
0.28	39.0	GmaAffx.93260.1.S1_at	CF808985	-	-	2e-2	At1g54820	protein kinase family protein	S.X.	H.G.	Please select
0.27	35.7	GmaAffx.70927.1.S1_at	AW156231	-	-	3e-5	At1g25390	protein kinase family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
22.2	99.8	GSM147941	Laser capture microdissected (LCM) endosperm at the globular stage, biological replicate 3	GSE6414	Expression data from soybean seed compartments with embryos at the globular stage
18.9	99.7	GSM292289	36_C081.1E.SLE2L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
15.8	99.6	GSM292292	39_C075.1E.R9E1L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
14.2	99.6	GSM147939	Laser capture microdissected (LCM) endosperm at the globular stage, biological replicate 1	GSE6414	Expression data from soybean seed compartments with embryos at the globular stage
11.1	99.4	GSM292299	46_1167.1E.R104L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.5	99.3	GSM292362	31_C095.1F.SLF1L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.2	99.3	GSM292284	31_1193.1E.R117L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.1	99.3	GSM292408	12_1265.1G.R168L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.1	99.3	GSM292274	19_C089.1E.R9E3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.5	99.2	GSM209593	susceptible_6hours_rep3	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	3e-1	36	GmaAffx.90159.1.S1_at	CF805884	-	-	5e+0	At4g22650	-	C.G.	S.X.	Please select
0.03	3e-1	36	GmaAffx.74898.1.S1_at	BM953831	-	-	5e+0	At5g12910	histone H3, putative	C.G.	S.X.	Please select
0.04	3e-1	36	GmaAffx.71055.1.S1_at	BQ627638	-	-	4e+0	At5g17130	cysteine-type peptidase	C.G.	S.X.	Please select
0.05	3e-1	36	GmaAffx.6037.1.A1_at	BU551251	-	-	7e-4	At1g64760	glycosyl hydrolase family 17 protein	C.G.	S.X.	Please select
0.03	3e-1	36	GmaAffx.48363.1.S1_at	CD414885	-	-	2e+0	At5g42860	unknown protein	C.G.	S.X.	Please select
0.05	3e-1	36	GmaAffx.11136.1.A1_at	CD396517	-	-	3e+0	At5g19370	rhodanese-like domain-containing protein / PPIC-type PPIASE domain-containing protein	C.G.	S.X.	Please select
0.04	3e-1	36	Gma.13006.1.S1_s_at	CD395352	-	-	4e+0	At2g43018	CPuORF17 (Conserved peptide upstream open reading frame 17)	C.G.	S.X.	Please select
0.03	1e+0	34	HgAffx.4347.1.S1_at	CD749077	-	-	1e+0	At4g09960	STK (SEEDSTICK)	C.G.	S.X.	Please select
0.04	1e+0	34	HgAffx.19718.1.S1_at	CA939462	-	-	8e-1	At4g20095	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	3e+0	32	Arabidopsis thaliana	At2g27320	817275	unknown protein	F:unknown;P:biological_process unknown;C:endomembrane system;PFB	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.05	1e+0	32	Hordeum vulgare	EBma08_SQ001_P14_at	EBma08_SQ001_P14	-	-	9e+0	At4g17990	unknown protein	C.G.	S.X.	Please select
0.03	6e+0	32	Oryza sativa	Os.51058.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	2e-1	36	Populus trichocarpa	PtpAffx.200111.1.S1_s_at	pmrna199	hypothetical protein	-	2e+0	At1g04750	VAMP721 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 721)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.05	2e-1	36	Triticum aestivum	Ta.10527.1.A1_at	BQ169960	-	-	4e+0	At1g52370	ribosomal protein L22 family protein	C.G.	S.X.	Please select
0.04	2e-1	34	Vitis vinifera	1607597_at	CF512500	-	-	4e+0	Atmg00320	-	C.G.	S.X.	Please select
0.04	2e+1	28	Zea mays	ZmAffx.182.1.A1_at	AI668332	-	-	3e+0	At1g68250	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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