Gene omics information

Query gene ID Gma.2668.2.A1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8091.5Gma.2668.2.A1_atBE821049--4e-6At5g42520ATBPC6S.X.H.G.
0.6786.1Gma.9522.1.S1_atAW307593MYB transcription factor MYB107-6e-7At1g17520DNA-binding protein, putativeS.X.H.G.
0.6080.7Gma.4225.1.S1_a_atAW317387--6e-13At1g02680TAF13 (TBP-ASSOCIATED FACTOR 13)S.X.H.G.
0.5071.7Gma.8062.1.A1_a_atBI971176--1e-7At2g21630transport protein, putativeS.X.H.G.
0.4360.6Gma.1066.1.S1_atBG363651--4e-67At3g13670protein kinase family proteinS.X.H.G.
0.3346.1GmaAffx.8927.1.S1_atAW349333--5e-32At4g39100SHL1 (short life)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
58.999.9GSM191088Soybean_Cotyledon_II2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stage
52.199.9GSM182044Laser capture microdissected (LCM) inner integument at the heart stage, biological replicate 2GSE7511Expression data from soybean seed compartments with embryos at the heart stage
44.299.9GSM201126Laser capture microdissected (LCM) seed coat parenchyma at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
35.999.9GSM191082Soybean_Cotyledon_EN2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stage
31.499.9GSM191087Soybean_Cotyledon_II1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stage
31.299.9GSM201127Laser capture microdissected (LCM) seed coat parenchyma at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
27.799.8GSM182037Laser capture microdissected (LCM) endothelium at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stage
24.499.8GSM191081Soybean_Cotyledon_EN1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stage
23.499.8GSM182038Laser capture microdissected (LCM) endothelium at the heart stage, biological replicate 2GSE7511Expression data from soybean seed compartments with embryos at the heart stage
23.299.8GSM147952Laser capture microdissected (LCM) inner integument at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stage
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.000967Gma.2668.2.A1_a_atBE821049--4e-6At5g42520ATBPC6C.G.S.X.
0.758e-101367Gma.2668.1.S1_atBE822257--4e-6At5g42520ATBPC6C.G.S.X.
0.034e-136HgAffx.2130.1.S1_atAY101191.1--2e+0At5g24860FPF1 (FLOWERING PROMOTING FACTOR 1)C.G.S.X.
0.021e+034PsAffx.C327000005_atPsAffx.C327000005--2e+0At3g47800aldose 1-epimerase family proteinC.G.S.X.
0.011e+034PsAffx.C105000008_atPsAffx.C105000008--9e+0At5g57130protein bindingC.G.S.X.
0.041e+034HgAffx.24259.1.S1_s_atBG310703--8e-1At3g26445glycosyl transferase family 17 proteinC.G.S.X.
0.041e+034GmaAffx.32328.1.A1_atBI968685NAC domain protein-1e+1At4g17720RNA recognition motif (RRM)-containing proteinC.G.S.X.
0.021e+034Gma.1929.1.S1_atBU083650--7e-10At2g22800HAT9C.G.S.X.
0.016e+032PsAffx.C69000061_atPsAffx.C69000061--5e+0At5g65320basic helix-loop-helix (bHLH) family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.134e-652Arabidopsis thalianaAt5g42520834259ATBPC6F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;PMOV---C.G.S.X.
0.041e-136Hordeum vulgareHI15L07r_s_atHI15L07r--1e+1At5g25540CID6 (CTC-Interacting Domain 6)C.G.S.X.
0.078e-652Oryza sativaOs06g0130600AK070616.1-GAGA binding-like domain containing protein1e-5At5g42520ATBPC6C.G.S.X.
0.153e-1789Populus trichocarpaPtp.1180.1.A1_atCV277694hypothetical protein-2e-30At5g42520ATBPC6C.G.S.X.
0.034e+032Triticum aestivumTaAffx.117592.1.S1_atCA654681--5e-9At1g32480oxidoreductase/ oxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptorC.G.S.X.
0.166e-2199Vitis vinifera1615073_atCD798908GAGA-binding transcriptional activator BBR/BPC6-like-1e-40At5g42520ATBPC6C.G.S.X.
0.037e+030Zea maysZm.8436.1.A1_atBM074113--5e+0At3g22900NRPD7C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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