Gene omics information

Query gene ID Gma.2563.2.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8793.2Gma.2563.2.S1_atBI316885--4e-4At2g46530ARF11 (AUXIN RESPONSE FACTOR 11)S.X.H.G.
0.4766.6Gma.10878.1.S1_atBE822379--3e+0At5g13430ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putativeS.X.H.G.
0.3853.3Gma.2563.1.S1_atBQ742867--2e-61At5g62000ARF2 (AUXIN RESPONSE FACTOR 2)S.X.H.G.
0.3346.1GmaAffx.58491.1.S1_atAW349481--1e-29At4g24860AAA-type ATPase family proteinS.X.H.G.
0.3243.7Gma.6346.1.S1_atBQ613019--5e-1At5g22510beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putativeS.X.H.G.
0.3142.2Gma.15275.1.S1_atBI974583--5e-21At3g22440hydroxyproline-rich glycoprotein family proteinS.X.H.G.
0.3142.2GmaAffx.79117.1.S1_atBU927275--8e-1At2g46330AGP16 (ARABINOGALACTAN PROTEIN 16)S.X.H.G.
0.1923.7Gma.3724.1.S1_atAW733510--2e+0At3g56580zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.1822.3GmaAffx.6019.1.S1_atBE191503--7e-24At4g18120AML3 (ARABIDOPSIS MEI2-LIKE 3)S.X.H.G.
0.1417.5GmaAffx.59623.1.S1_atBI699291--2e+0At1g74230GR-RBP5 (glycine-rich RNA-binding protein 5)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
10.299.3GSM191081Soybean_Cotyledon_EN1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stage
9.399.2GSM191082Soybean_Cotyledon_EN2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stage
6.798.7GSM182038Laser capture microdissected (LCM) endothelium at the heart stage, biological replicate 2GSE7511Expression data from soybean seed compartments with embryos at the heart stage
6.598.7GSM147944Laser capture microdissected (LCM) endothelium at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stage
6.598.7GSM182037Laser capture microdissected (LCM) endothelium at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stage
5.398.2GSM209579susceptible_24hours_rep1 *failed QC*GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
4.897.9GSM209597susceptible_24hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
4.797.8GSM29221886-C016.1A.V7A3P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.797.8GSM258505Soybean shoot apical meristem, 6 short-day replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
4.697.7GSM201109Laser capture microdissected (LCM) cotyledon abaxial epidermis at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.410858Gma.2563.1.S1_a_atBQ742867--2e-61At5g62000ARF2 (AUXIN RESPONSE FACTOR 2)C.G.S.X.
0.410858Gma.2563.1.S1_atBQ742867--2e-61At5g62000ARF2 (AUXIN RESPONSE FACTOR 2)C.G.S.X.
0.094e-48192Gma.5347.1.S1_atAW348518--7e-21At5g62000ARF2 (AUXIN RESPONSE FACTOR 2)C.G.S.X.
0.074e-859Gma.7493.1.A1_atBQ611096--4e-16At4g23980ARF9 (AUXIN RESPONSE FACTOR 9)C.G.S.X.
0.092e-654Gma.6662.1.S1_atBI968600--2e-11At4g23980ARF9 (AUXIN RESPONSE FACTOR 9)C.G.S.X.
0.042e-344GmaAffx.1301.90.S1_s_atBU764871--1e+1Atmg00650-C.G.S.X.
0.034e-240GmaAffx.22098.1.S1_atBE806739DNA mismatch repair protein-3e+0At3g24320MSH1 (MUTL PROTEIN HOMOLOG 1)C.G.S.X.
0.034e-240GmaAffx.10583.1.A1_atBU551095--3e+0At3g59530strictosidine synthase family proteinC.G.S.X.
0.031e-138GmaAffx.37212.1.S1_atBM522842--2e+0At4g39570kelch repeat-containing F-box family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.044e-446Arabidopsis thalianaAt2g46530819264ARF11 (AUXIN RESPONSE FACTOR 11)F:transcription factor activity;P:response to hormone stimulus, regulation of transcription, DNA-dependent, regulation of transcription;C:nucleus;POMF---C.G.S.X.
0.031e-240Hordeum vulgareHB19F10r_atHB19F10r--2e-29At2g34420LHB1B2C.G.S.X.
0.062e-1067Oryza sativaOs01g0927600AK072309.1-AUX/IAA protein family protein6e-28At5g62000ARF2 (AUXIN RESPONSE FACTOR 2)C.G.S.X.
0.107e-1995Populus trichocarpaPtpAffx.7169.1.A1_atCV237696hypothetical protein-9e-5At2g46530ARF11 (AUXIN RESPONSE FACTOR 11)C.G.S.X.
0.117e-652Triticum aestivumTa.2593.3.S1_x_atCA665053--4e-1At4g23980ARF9 (AUXIN RESPONSE FACTOR 9)C.G.S.X.
0.124e-29127Vitis vinifera1611882_atCF512921hypothetical protein LOC100268072-7e-13At5g62000ARF2 (AUXIN RESPONSE FACTOR 2)C.G.S.X.
0.063e-342Zea maysZm.6451.2.S1_a_atAI770434--2e-4At1g59750ARF1 (AUXIN RESPONSE FACTOR 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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