Gene omics information

Query gene ID Gma.2534.1.S1_s_at
Gene name Ubiquitin
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6583.8Gma.2534.1.S1_s_atBI967545Ubiquitin-2e-140At4g05320UBQ10 (POLYUBIQUITIN 10)S.X.H.G.
0.9298.9GmaAffx.91487.1.S1_atCF807212elongation factor 1A SMV resistance-related protein-2e-114At5g60390elongation factor 1-alpha / EF-1-alphaS.X.H.G.
0.8291.9GmaAffx.91554.1.S1_s_atCF807279--2e-63At1g26630FBR12 (FUMONISIN B1-RESISTANT12)S.X.H.G.
0.8191.7GmaAffx.91487.1.S1_x_atCF807212elongation factor 1A SMV resistance-related protein-2e-114At5g60390elongation factor 1-alpha / EF-1-alphaS.X.H.G.
0.8091.5GmaAffx.60419.1.S1_s_atBQ611901elongation factor 1A SMV resistance-related protein-7e-1At5g60430antiporter/ drug transporterS.X.H.G.
0.8091.5Gma.2534.2.S1_s_atCD393721--2e-76At4g02890UBQ14S.X.H.G.
0.7790.3Gma.17246.1.S1_s_atCD402136--2e-12At1g2688060S ribosomal protein L34 (RPL34A)S.X.H.G.
0.7288.1Gma.16125.1.S1_atBQ298270--6e-46At3g61110ARS27A (ARABIDOPSIS RIBOSOMAL PROTEIN S27)S.X.H.G.
0.7087.1Gma.4208.2.S1_s_atCD401340--2e-34At1g22780PFL (POINTED FIRST LEAVES)S.X.H.G.
0.5979.5GmaAffx.88908.1.A1_x_atCK605775--2e-28At5g59880ADF3 (ACTIN DEPOLYMERIZING FACTOR 3)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
18.999.7GSM182032Laser capture microdissected (LCM) suspensor at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stage
13.399.5GSM147938Laser capture microdissected (LCM) suspensor at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stage
13.299.5GSM147937Laser capture microdissected (LCM) suspensor at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stage
12.799.5GSM147951Laser capture microdissected (LCM) inner integument at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stage
9.799.3GSM147953Laser capture microdissected (LCM) inner integument at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stage
6.798.7GSM29364168_2065.2B.R129U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.498.6GSM147941Laser capture microdissected (LCM) endosperm at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stage
6.498.6GSM182044Laser capture microdissected (LCM) inner integument at the heart stage, biological replicate 2GSE7511Expression data from soybean seed compartments with embryos at the heart stage
5.598.3GSM147944Laser capture microdissected (LCM) endothelium at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stage
5.498.2GSM147952Laser capture microdissected (LCM) inner integument at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stage
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.6401967GmaAffx.89861.1.A1_atCK606562--3e-127At4g05320UBQ10 (POLYUBIQUITIN 10)C.G.S.X.
0.6701967GmaAffx.89861.1.S1_s_atCK606562Ubiquitin-3e-127At4g05320UBQ10 (POLYUBIQUITIN 10)C.G.S.X.
0.7801923GmaAffx.93644.1.S1_x_atCF806647Ubiquitin-7e-139At4g05320UBQ10 (POLYUBIQUITIN 10)C.G.S.X.
0.550987GmaAffx.89861.2.A1_atCK605923--1e-121At4g05050UBQ11 (UBIQUITIN 11)C.G.S.X.
0.460745Gma.2534.3.S1_x_atAI443822--2e-85At4g05050UBQ11 (UBIQUITIN 11)C.G.S.X.
0.442e-178626Gma.2534.2.S1_s_atCD393721--2e-76At4g02890UBQ14C.G.S.X.
0.443e-146519Gma.7789.1.S1_atBI321596--0At4g05320UBQ10 (POLYUBIQUITIN 10)C.G.S.X.
0.481e-105385Gma.17451.1.S1_atAW350045--7e-109At4g05320UBQ10 (POLYUBIQUITIN 10)C.G.S.X.
0.481e-105385Gma.17451.1.S1_x_atAW350045--7e-109At4g05320UBQ10 (POLYUBIQUITIN 10)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.622e-140500Arabidopsis thalianaAt4g05320825880UBQ10 (POLYUBIQUITIN 10)One of five polyubiquitin genes in A. thaliana. These genes encode the highly conserved 76-amino acid protein ubiquitin that is covalently attached to substrate proteins targeting most for degradation. Polyubiquitin genes are characterized by the presence of tandem repeats of the 228 bp that encode a ubiquitin monomer. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid.---C.G.S.X.
0.580692Hordeum vulgareContig1050_s_atContig1050--4e-162At4g02890UBQ14C.G.S.X.
0.550692Oryza sativaOs02g0161900AK101547.1-Ubiquitin0At4g05320UBQ10 (POLYUBIQUITIN 10)C.G.S.X.
0.552e-91337Populus trichocarpaPtp.4343.1.S1_atCV267074hypothetical protein-3e-95At5g03240UBQ3 (POLYUBIQUITIN 3)C.G.S.X.
0.540785Triticum aestivumTa.28553.12.S1_x_atBJ242344Polyubiquitin-9e-164At4g02890UBQ14C.G.S.X.
0.472e-168591Vitis vinifera1616334_a_atCB917599--0At4g05320UBQ10 (POLYUBIQUITIN 10)C.G.S.X.
0.529e-162569Zea maysZm.7727.4.S1_s_atCF972403polyubiquitin containing 7 ubiquitin monomers /// ubiquitin /// polyubiquitin-2e-102At4g05320UBQ10 (POLYUBIQUITIN 10)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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