Gene omics information

Query gene ID Gma.2457.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7087.1Gma.2457.1.S1_atBI967559--2e+0At1g61795-S.X.H.G.
0.7890.6Gma.4927.1.S1_atBG510284--7e-3At4g15236ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide bindingS.X.H.G.
0.7187.8Gma.11238.1.S1_atBQ454110--3e-121At5g60600HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE)S.X.H.G.
0.6382.9GmaAffx.77778.1.S1_atAW185540--5e+0At5g52480-S.X.H.G.
0.5576.3Gma.11238.1.S1_a_atBQ454110--3e-121At5g60600HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE)S.X.H.G.
0.5374.2GmaAffx.93103.1.S1_s_atCF808828--5e-3At4g15236ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide bindingS.X.H.G.
0.5071.7GmaAffx.92184.1.S1_s_atCF807909--3e-1At2g16900-S.X.H.G.
0.4867.7GmaAffx.90026.1.S1_s_atCF805751--5e-18At5g60600HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE)S.X.H.G.
0.4463.3GmaAffx.33296.1.S1_atBM522949--4e-4At1g68710haloacid dehalogenase-like hydrolase family proteinS.X.H.G.
0.3751.7Gma.1824.1.S1_atBI469795--7e-16At5g26030FC1 (ferrochelatase 1)S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
16.999.7GSM29404796_3095.2F.R9F1L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
16.699.6GSM29227419_C089.1E.R9E3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
13.599.5GSM29229239_C075.1E.R9E1L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
13.299.5GSM2449349_SLO.I2W4.CEL, Experimental replicate 4GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
10.499.3GSM29228936_C081.1E.SLE2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.099.3GSM29238459_C093.1F.R9F1L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.599.2GSM29240812_1265.1G.R168L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.499.2GSM24487432_CON.I2W4.CEL, Experimental replicate 4GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
9.499.2GSM29228431_1193.1E.R117L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.299.2GSM29388738_2229.2E.R022L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.156e-2099Gma.13230.1.A1_atCD396073--2e-1At4g24805methyltransferaseC.G.S.X.
0.211e-1791Gma.15135.1.S1_atBU548448--2e-4At1g03740ATP binding / kinase/ protein kinase/ protein serine/threonine kinaseC.G.S.X.
0.065e-550GmaAffx.92548.1.S1_atCF808273--3e-1At4g10010protein kinase family proteinC.G.S.X.
0.065e-550GmaAffx.92548.1.S1_s_atCF808273--3e-1At4g10010protein kinase family proteinC.G.S.X.
0.032e-138GmaAffx.61076.1.S1_atCA783359--9e-1At5g63470NF-YC4 (NUCLEAR FACTOR Y, SUBUNIT C4)C.G.S.X.
0.037e-136GmaAffx.78344.1.S1_atBM886517--1e-1At3g42628phosphoenolpyruvate carboxylase-related / PEP carboxylase-relatedC.G.S.X.
0.033e+034GmaAffx.89702.1.A1_atCK606092--2e-1At5g18290SIP1C.G.S.X.
0.023e+034GmaAffx.4908.1.A1_atBI969732--3e+0Atcg00150-C.G.S.X.
0.023e+034GmaAffx.37161.1.S1_atBM308422--7e-1At5g37890seven in absentia (SINA) protein, putativeC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e+034Arabidopsis thalianaAt1g617955007827-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P---C.G.S.X.
0.026e-238Hordeum vulgareHZ36N03r_atHZ36N03r--5e+0At5g58900myb family transcription factorC.G.S.X.
0.024e+034Oryza sativaOs.7574.1.S1_s_at---0C.G.S.X.
0.047e-136Populus trichocarpaPtpAffx.132322.1.A1_a_atCV241725hypothetical protein-6e-6At1g53050protein kinase family proteinC.G.S.X.
0.035e-136Triticum aestivumTa.28778.1.S1_atAJ604461--7e-1At1g64340unknown proteinC.G.S.X.
0.026e-134Vitis vinifera1612050_atCF208838--8e-5At5g24090acidic endochitinase (CHIB1)C.G.S.X.
0.024e+032Zea maysZm.5948.2.A1_atBE643594--1e+1At5g08190NF-YB12 (NUCLEAR FACTOR Y, SUBUNIT B12)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage