Gene omics information

Query gene ID Gma.2313.2.S1_s_at
Gene name hypothetical LOC547601
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5979.5Gma.2313.2.S1_s_atBI700522hypothetical LOC547601-2e-35At4g27450unknown proteinS.X.H.G.
0.9198.6GmaAffx.92834.1.S1_atCF808559--6e-6At5g28050cytidine/deoxycytidylate deaminase family proteinS.X.H.G.
0.8392.5GmaAffx.92834.1.S1_x_atCF808559--6e-6At5g28050cytidine/deoxycytidylate deaminase family proteinS.X.H.G.
0.6786.1Gma.10907.1.S1_s_atCA851238--1e-5At4g27450unknown proteinS.X.H.G.
0.6786.1Gma.3508.1.S1_s_atBI968765--5e-71At5g56870BGAL4 (beta-galactosidase 4)S.X.H.G.
0.6080.7Gma.4182.1.S1_s_atCF920322--5e-7At5g28050cytidine/deoxycytidylate deaminase family proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
7.398.9GSM209594resistant_12hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
6.398.6GSM29327156_C056.1P.V7P1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.198.5GSM29402576_3104.2F.V7F3P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.998.5GSM209574resistant_6hours_rep1GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
5.698.3GSM29400659_3094.2F.V7F1P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.698.3GSM209579susceptible_24hours_rep1 *failed QC*GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
5.598.3GSM209575susceptible_6hours_rep1GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
5.498.2GSM29375789_3048.2C.V7C2P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.398.2GSM29259626_C146.1I.V7I1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.298.1GSM29283616_1473.1L.R287U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.6501358GmaAffx.93368.1.S1_atCF807432Unknown mRNA-8e-43At4g27450unknown proteinC.G.S.X.
0.5801310Gma.13361.1.S1_atAW309932Unknown mRNA-1e-42At4g27450unknown proteinC.G.S.X.
0.276e-144511Gma.2313.1.S1_atAF452454.1ATP sulfurylase-1e-83At3g22890APS1 (ATP SULFURYLASE 1)C.G.S.X.
0.276e-144511Gma.2313.1.S1_s_atAF452454.1ATP sulfurylase-1e-83At3g22890APS1 (ATP SULFURYLASE 1)C.G.S.X.
0.395e-101369Gma.7163.2.S1_atBE661209--1e-12At4g27450unknown proteinC.G.S.X.
0.253e-53210Gma.7163.1.A1_atCD408246--2e-26At4g27450unknown proteinC.G.S.X.
0.092e-861Gma.10907.3.S1_atBM524276--2e-2At4g27450unknown proteinC.G.S.X.
0.152e-861Gma.10907.2.S1_s_atAI900862--2e-7At4g27450unknown proteinC.G.S.X.
0.102e-861Gma.10907.1.S1_s_atCA851238--1e-5At4g27450unknown proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.302e-35151Arabidopsis thalianaAt4g27450828854unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cytosol, nucleus, plasma membrane;PBOMF---C.G.S.X.
0.086e-961Hordeum vulgareContig14399_atContig14399--5e-3At5g43780APS4C.G.S.X.
0.081e-965Oryza sativaOs03g0743900AK099593.1-ATP sulfurylase (EC 2.7.7.4)1e-24At3g22890APS1 (ATP SULFURYLASE 1)C.G.S.X.
0.396e-42173Populus trichocarpaPtpAffx.10911.2.A1_atCV250272hypothetical protein-3e-24At4g27450unknown proteinC.G.S.X.
0.065e-859Triticum aestivumTa.9352.1.S1_atCD870241--2e-14At3g22890APS1 (ATP SULFURYLASE 1)C.G.S.X.
0.235e-48190Vitis vinifera1618856_atCF207023.1--6e-46At4g27450unknown proteinC.G.S.X.
0.051e-654Zea maysZm.5050.1.S1_atAF016305.1ATP sulfurylase-1e-21At3g22890APS1 (ATP SULFURYLASE 1)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage