Gene omics information

Query gene ID Gma.2266.1.S1_s_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8291.9Gma.2266.1.S1_s_atBG839284--2e-48At2g37040pal1 (Phe ammonia lyase 1)S.X.H.G.
0.5576.3Gma.10705.1.S1_a_atCD393805plastid glucose 6 phosphate/phosphate translocator-like-3e-47At5g54800GPT1S.X.H.G.
0.5576.3Gma.10705.1.S1_atCD393805plastid glucose 6 phosphate/phosphate translocator-like-3e-47At5g54800GPT1S.X.H.G.
0.5071.7GmaAffx.93071.1.S1_s_atCF808796--2e-52At5g13420transaldolase, putativeS.X.H.G.
0.4360.6Gma.7492.1.S1_atAW597705--1e-45At3g22200POP2 (POLLEN-PISTIL INCOMPATIBILITY 2)S.X.H.G.
0.4057.1Gma.11220.2.S1_a_atCF920389--2e-19At4g29010AIM1 (ABNORMAL INFLORESCENCE MERISTEM)S.X.H.G.
0.3346.1Gma.4310.1.S1_atBE822674chorismate synthase-3e-58At1g48850EMB1144 (embryo defective 1144)S.X.H.G.
0.3142.2Gma.3881.1.S1_atX92437.1--8e-23At2g30490C4H (CINNAMATE-4-HYDROXYLASE)S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.398.6GSM17160812_Y.E.I.3, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
4.697.7GSM17163218_W.E.I.3, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
4.097.2GSM17166626_V.E.I.3, Experimental replicate VGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
3.897.0GSM29315162_C049.1O.SLO3U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.796.8GSM29325743_1201.1P.R124U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.796.8GSM29374578_3049.2C.SLC3L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.796.8GSM17165924_W.F.I.3, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
3.796.8GSM1717239_W.K.I.3, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
3.796.8GSM29369129_3045.2C.SLC2L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.696.7GSM17161614_Y.F.I.3, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.418e-116418GmaAffx.89508.1.A1_s_atCK606172--4e-1At3g10340PAL4 (Phenylalanine ammonia-lyase 4)C.G.S.X.
0.132e-88327GmaAffx.86773.1.S1_s_atBQ576578--2e-12At3g10340PAL4 (Phenylalanine ammonia-lyase 4)C.G.S.X.
0.163e-72274GmaAffx.29412.1.S1_s_atCA851741--7e-1At2g04845GCN5-related N-acetyltransferase (GNAT) family proteinC.G.S.X.
0.354e-65250GmaAffx.90449.1.S1_atCF806174--2e-14At3g53260PAL2C.G.S.X.
0.291e-62242GmaAffx.93094.1.S1_s_atCF805936--5e+0At3g05810unknown proteinC.G.S.X.
0.268e-39163Gma.2887.1.S1_s_atCD417784--1e-23At4g3386540S ribosomal protein S29 (RPS29C)C.G.S.X.
0.252e-36155GmaAffx.59470.1.S1_atBI469872--5e-18At3g53260PAL2C.G.S.X.
0.157e-30133Gma.2887.2.S1_x_atBI701520--3e+0At3g05810unknown proteinC.G.S.X.
0.051e-346GmaAffx.75675.1.A1_atAW351172--6e-1At5g11120unknown proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.202e-48194Arabidopsis thalianaAt2g37040818280pal1 (Phe ammonia lyase 1)encodes a protein similar to phenylalanine ammonia-lyase---C.G.S.X.
0.201e-1997Hordeum vulgareContig1797_x_atContig1797--1e-19At3g10340PAL4 (Phenylalanine ammonia-lyase 4)C.G.S.X.
0.138e-1273Oryza sativaOs02g0626400BI807677-Phenylalanine ammonia-lyase (EC 4.3.1.5)1e-19At3g10340PAL4 (Phenylalanine ammonia-lyase 4)C.G.S.X.
0.482e-122440Populus trichocarpaPtpAffx.1672.2.A1_x_atAF480619.1--8e-24At2g37040pal1 (Phe ammonia lyase 1)C.G.S.X.
0.171e-1895Triticum aestivumTa.28736.1.S1_atAY005474.1inducible phenylalanine ammonia-lyase-3e-14At3g10340PAL4 (Phenylalanine ammonia-lyase 4)C.G.S.X.
0.512e-113408Vitis vinifera1610206_atCF511227hypothetical protein LOC100241377-2e-29At3g10340PAL4 (Phenylalanine ammonia-lyase 4)C.G.S.X.
0.054e-136Zea maysZm.15903.3.A1_atAY104679.1hypothetical protein LOC100273579-4e-12At3g10340PAL4 (Phenylalanine ammonia-lyase 4)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage