Gene omics information

Query gene ID	Gma.2188.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.78	90.6	Gma.2188.1.S1_at	BQ576507	-	-	3e-9	At5g25830	zinc finger (GATA type) family protein	S.X.	H.G.	Please select
0.88	93.4	GmaAffx.39104.1.S1_at	AW278809	-	-	7e-2	At4g37520	peroxidase 50 (PER50) (P50) (PRXR2)	S.X.	H.G.	Please select
0.61	81.8	Gma.405.1.A1_at	AI443411	-	-	3e-3	At5g12940	leucine-rich repeat family protein	S.X.	H.G.	Please select
0.61	81.8	GmaAffx.80779.1.S1_at	BI784533	-	-	2e-2	At4g32890	zinc finger (GATA type) family protein	S.X.	H.G.	Please select
0.57	78.8	GmaAffx.6711.1.S1_at	AW350271	-	-	2e-30	At5g57090	EIR1 (ETHYLENE INSENSITIVE ROOT 1)	S.X.	H.G.	Please select
0.50	71.7	Gma.4923.1.S1_at	BI969859	-	-	2e-2	At1g74500	bHLH family protein	S.X.	H.G.	Please select
0.46	65.5	Gma.6494.1.S1_at	BI784551	-	-	3e-41	At2g12646	-	S.X.	H.G.	Please select
0.43	60.6	Gma.6158.1.S1_at	BI699029	-	-	7e-13	At2g43480	peroxidase, putative	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
21.0	99.7	GSM294496	60_2509.2K.R241L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
14.5	99.6	GSM294492	57_2498.2K.R218P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
13.6	99.5	GSM294423	79_2455.2J.R220L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
12.3	99.5	GSM294583	52_2568.2L.R219P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
12.2	99.5	GSM293684	22_2141.2C.R116U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
11.8	99.4	GSM294581	50_2559.2L.R195L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
11.3	99.4	GSM294469	36_2484.2K.R271P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
11.2	99.4	GSM294402	5_2437.2J.R091L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.6	99.3	GSM294259	19_2390.2I.R033P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.5	99.3	GSM294358	1_2468.2J.R216P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.08	4e-3	42	GmaAffx.32030.1.A1_at	BU547281	-	-	2e-9	At4g32890	zinc finger (GATA type) family protein	C.G.	S.X.	Please select
0.01	3e-1	36	PsAffx.C54000015_s_at	PsAffx.C54000015	-	-	1e-2	At5g37200	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.01	3e-1	36	PsAffx.C54000015_at	PsAffx.C54000015	-	-	1e-2	At5g37200	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.01	3e-1	36	PsAffx.C52000018_s_at	PsAffx.C52000018	-	-	6e-3	At5g37200	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.01	3e-1	36	PsAffx.C52000018_at	PsAffx.C52000018	-	-	6e-3	At5g37200	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.01	3e-1	36	PsAffx.C148000052_s_at	PsAffx.C148000052	-	-	1e-1	At4g29880	protein binding	C.G.	S.X.	Please select
0.01	3e-1	36	PsAffx.C148000052_at	PsAffx.C148000052	-	-	1e-1	At4g29880	protein binding	C.G.	S.X.	Please select
0.03	3e-1	36	Gma.9650.1.S1_at	CA938402	-	-	3e-8	At3g22970	unknown protein	C.G.	S.X.	Please select
0.04	1e+0	34	HgAffx.19634.1.S1_at	CD748248	-	-	4e-1	At4g37720	ATPSK6 (PHYTOSULFOKINE 6 PRECURSOR)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.12	3e-9	61	Arabidopsis thaliana	At5g25830	832652	zinc finger (GATA type) family protein	F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus;PFOM	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.07	6e-6	50	Hordeum vulgare	Contig2157_at	Contig2157	-	-	1e-12	At4g32890	zinc finger (GATA type) family protein	C.G.	S.X.	Please select
0.08	2e-9	63	Oryza sativa	Os01g0745700	AK121896.1	-	Zn-finger, GATA type domain containing protein	6e-11	At4g32890	zinc finger (GATA type) family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	4e+0	32	Populus trichocarpa	PtpAffx.40515.1.A1_at	DN492251	hypothetical protein	-	8e-12	At5g25830	zinc finger (GATA type) family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.18	8e-4	44	Triticum aestivum	TaAffx.32118.1.S1_at	CA600585	-	-	1e-28	At4g32890	zinc finger (GATA type) family protein	C.G.	S.X.	Please select
0.04	6e-2	36	Vitis vinifera	1615028_at	CF512306	hypothetical protein LOC100244467	-	5e-20	At3g60530	zinc finger (GATA type) family protein	C.G.	S.X.	Please select
0.04	5e+0	30	Zea mays	ZmAffx.963.1.A1_at	AI833792	-	-	8e-1	At4g04620	ATG8B (autophagy 8b)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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