Gene omics information

Query gene ID Gma.2172.2.S1_a_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7087.1Gma.2172.2.S1_a_atBI426425--1e-145At1g55360unknown proteinS.X.H.G.
0.3142.2Gma.969.1.S1_atAW424155--1e-2At1g18840IQD30S.X.H.G.
0.2735.7GmaAffx.81135.1.S1_atBE805364--1e-13At4g18820ATP binding / DNA binding / DNA-directed DNA polymerase/ nucleoside-triphosphatase/ nucleotide bindingS.X.H.G.
0.1721.2Gma.8056.1.S1_atBE057392--4e+0At5g34940AtGUS3 (Arabidopsis thaliana glucuronidase 3)S.X.H.G.
0.1114.2Gma.7275.1.A1_atBI968724--6e-6At1g76510ARID/BRIGHT DNA-binding domain-containing proteinS.X.H.G.
0.1013.0Gma.9678.1.S1_atCD404894--2e-6At4g14660NRPE7S.X.H.G.
0.069.0Gma.13815.1.S1_atCD406399--4e-53At4g22140DNA binding / protein binding / zinc ion bindingS.X.H.G.
0.024.5Gma.12774.1.A1_atCD397408--7e-1At3g08700UBC12 (ubiquitin-conjugating enzyme 12)S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
58.099.9GSM201110Laser capture microdissected (LCM) cotyledon abaxial parenchyma at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
51.699.9GSM201114Laser capture microdissected (LCM) cotyledon adaxial parenchyma at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
41.799.9GSM201105Laser capture microdissected (LCM) axis shoot meristem at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
36.599.9GSM201104Laser capture microdissected (LCM) axis shoot meristem at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
36.199.9GSM201098Laser capture microdissected (LCM) axis plumule at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
33.499.9GSM201111Laser capture microdissected (LCM) cotyledon abaxial parenchyma at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
32.999.9GSM201115Laser capture microdissected (LCM) cotyledon adaxial parenchyma at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
29.299.8GSM201101Laser capture microdissected (LCM) axis parenchyma at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
26.699.8GSM201116Laser capture microdissected (LCM) cotyledon vascular bundle at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
26.299.8GSM201117Laser capture microdissected (LCM) cotyledon vascular bundle at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.393e-24113GmaAffx.89865.1.A1_s_atCK606142--1e-39At3g13510unknown proteinC.G.S.X.
0.393e-24113GmaAffx.89865.1.A1_atCK606142--1e-39At3g13510unknown proteinC.G.S.X.
0.153e-24113GmaAffx.89865.1.S1_atCK606142--1e-39At3g13510unknown proteinC.G.S.X.
0.162e-963Gma.6529.2.S1_s_atBM309390--6e-6At3g13510unknown proteinC.G.S.X.
0.042e-344GmaAffx.79727.1.S1_atAW203644--1e-37At3g13510unknown proteinC.G.S.X.
0.129e-342GmaAffx.50911.1.S1_atBM178585--4e-46At5g18460unknown proteinC.G.S.X.
0.035e-136GmaAffx.24359.1.A1_atBU544840--1e+0At2g06983SCRL16 (SCR-Like 16)C.G.S.X.
0.015e-136Gma.16500.1.S1_atBE059054--2e-5At1g55020LOX1C.G.S.X.
0.015e-136Gma.11166.1.S1_atAW705829lipoxygenase-9-8e-1At3g22400LOX5C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.631e-145515Arabidopsis thalianaAt1g55360841982unknown proteinF:unknown;P:biological_process unknown;C:endomembrane system;PFB---C.G.S.X.
0.195e-1477Hordeum vulgareContig5275_atContig5275--3e-22At3g13510unknown proteinC.G.S.X.
0.262e-29131Oryza sativaOs07g0573400AK121705.1-Protein of unknown function DUF239 domaincontaining protein8e-42At3g13510unknown proteinC.G.S.X.
0.473e-172605Populus trichocarpaPtpAffx.8523.1.S1_atCV239620hypothetical protein-9e-106At1g55360unknown proteinC.G.S.X.
0.221e-1377Triticum aestivumTa.5845.1.S1_x_atCK153266--3e-13At3g13510unknown proteinC.G.S.X.
0.642e-163573Vitis vinifera1620804_atCD797824hypothetical protein LOC100267227-3e-114At1g55360unknown proteinC.G.S.X.
0.298e-1683Zea maysZm.10376.1.S1_atBQ538350--2e-11At3g13510unknown proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage