Gene omics information

Query gene ID Gma.2053.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.6Gma.2053.1.S1_atBE209499--5e-56At5g4876060S ribosomal protein L13A (RPL13aD)S.X.H.G.
0.8091.5GmaAffx.93249.1.S1_atCF807720--5e-35At4g3467040S ribosomal protein S3A (RPS3aB)S.X.H.G.
0.7388.9Gma.10577.1.S1_x_atCD416202--7e-49At1g23290RPL27ABS.X.H.G.
0.6786.1Gma.15407.2.S1_s_atBU763329--4e-38At1g69410ELF5A-3 (EUKARYOTIC ELONGATION FACTOR 5A-3)S.X.H.G.
0.6382.9Gma.2921.1.A1_s_atCD417900--4e-6At3g5602060S ribosomal protein L41 (RPL41G)S.X.H.G.
0.4057.1GmaAffx.90664.1.S1_s_atCF809097--4e-35At1g35550elongation factor Tu C-terminal domain-containing proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
11.799.4GSM201106Laser capture microdissected (LCM) axis vascular bundle at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
11.199.4GSM147950Laser capture microdissected (LCM) hilum at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stage
10.499.3GSM147934Laser capture microdissected (LCM) embryo proper at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stage
10.499.3GSM147945Laser capture microdissected (LCM) epidermis at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stage
10.199.3GSM147947Laser capture microdissected (LCM) epidermis at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stage
10.099.3GSM147946Laser capture microdissected (LCM) epidermis at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stage
9.999.3GSM201103Laser capture microdissected (LCM) axis root meristem at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
9.899.3GSM182029Laser capture microdissected (LCM) embryo proper at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stage
9.499.2GSM147944Laser capture microdissected (LCM) endothelium at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stage
9.399.2GSM147949Laser capture microdissected (LCM) hilum at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stage
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.680751Gma.18037.1.S1_atBU549263--2e-56At3g0711060S ribosomal protein L13A (RPL13aA)C.G.S.X.
0.666e-140498GmaAffx.43889.1.S1_s_atAW472039--3e-26At4g1317060S ribosomal protein L13A (RPL13aC)C.G.S.X.
0.034e-240HgAffx.19634.1.S1_atCD748248--4e-1At4g37720ATPSK6 (PHYTOSULFOKINE 6 PRECURSOR)C.G.S.X.
0.042e-138GmaAffx.614.1.S1_atBE583746--1e+1At5g46873-C.G.S.X.
0.026e-136PsAffx.CL1570Contig1_atPsAffx.CL1570Contig1--5e-1At3g2483060S ribosomal protein L13A (RPL13aB)C.G.S.X.
0.026e-136Gma.16585.1.S1_atCA850597--6e-16At1g70410carbonic anhydrase, putative / carbonate dehydratase, putativeC.G.S.X.
0.026e-136Gma.16585.1.S1_x_atCA850597--6e-16At1g70410carbonic anhydrase, putative / carbonate dehydratase, putativeC.G.S.X.
0.033e+034PsAffx.psHB016xH11f_atPsAffx.psHB016xH11f--1e+1At5g59060unknown proteinC.G.S.X.
0.023e+034PsAffx.C356000003_atPsAffx.C356000003--1e+0At5g62500ATEB1B (END BINDING PROTEIN 1B)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.655e-56218Arabidopsis thalianaAt5g4876083493460S ribosomal protein L13A (RPL13aD)F:structural constituent of ribosome;P:translation;C:cytosolic ribosome, cytosolic large ribosomal subunit, large ribosomal subunit;BOMAPF---C.G.S.X.
0.293e-22105Hordeum vulgareContig1139_s_atContig1139--1e-19At3g0711060S ribosomal protein L13A (RPL13aA)C.G.S.X.
0.304e-43176Oryza sativaOs07g0109500NM_186164.1-Ribosomal protein L13 family protein1e-16At3g0711060S ribosomal protein L13A (RPL13aA)C.G.S.X.
0.392e-78293Populus trichocarpaPtp.2448.1.S1_atCV233899hypothetical protein-5e-57At3g2483060S ribosomal protein L13A (RPL13aB)C.G.S.X.
0.274e-26119Triticum aestivumTa.807.2.S1_atBQ801369--1e-23At3g0711060S ribosomal protein L13A (RPL13aA)C.G.S.X.
0.401e-44178Vitis vinifera1608162_atBQ796557hypothetical protein LOC100267451-1e-54At3g0711060S ribosomal protein L13A (RPL13aA)C.G.S.X.
0.223e-25115Zea maysZm.4020.1.A1_atCF637232hypothetical protein LOC100191912-2e-17At3g0711060S ribosomal protein L13A (RPL13aA)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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