Gene omics information

Query gene ID Gma.2019.1.S1_at
Gene name lipoxygenase
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7589.5Gma.2019.1.S1_atU26457.1lipoxygenase-2e-3At1g55020LOX1S.X.H.G.
0.9298.9Gma.529.1.S1_a_atAI939079--4e-11At5g34850PAP26 (PURPLE ACID PHOSPHATASE 26)S.X.H.G.
0.9298.9Gma.529.1.S1_atAI939079--4e-11At5g34850PAP26 (PURPLE ACID PHOSPHATASE 26)S.X.H.G.
0.9298.9Gma.529.1.S1_x_atAI939079--4e-11At5g34850PAP26 (PURPLE ACID PHOSPHATASE 26)S.X.H.G.
0.8392.5Gma.15856.2.S1_atBE059022--7e-6At5g18280ATAPY2 (ARABIDOPSIS THALIANA APYRASE 2)S.X.H.G.
0.7790.3Gma.15856.1.S1_atBE658716--5e+0Atmg01120-S.X.H.G.
0.6181.8Gma.5793.1.S1_s_atM37530.128 kDa protein-1e-2At5g24780VSP1 (VEGETATIVE STORAGE PROTEIN 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
46.999.9GSM238050Soybean-Mandarin-6-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
46.599.9GSM29221781-C005.1A.SLA1U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
42.099.9GSM29425717_3149.2I.SLI1U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
38.799.9GSM238047Soybean-Mandarin-1-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
37.599.9GSM238041Soybean-Bayfield-4-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
37.499.9GSM238059Soybean-S03W4-3-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
35.399.9GSM238038Soybean-Bayfield-2-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
35.199.9GSM238036Soybean-Bayfield-1-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
34.399.9GSM29302126_C021.1N.SLN1U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
33.599.9GSM238043Soybean-Bayfield-5-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.7801600Gma.7625.1.S1_s_atU04526.1lipoxygenase-9e-5At1g55020LOX1C.G.S.X.
0.269e-157555GmaAffx.90937.1.A1_atCF807838--1e+0At5g14930SAG101 (SENESCENCE-ASSOCIATED GENE 101)C.G.S.X.
0.335e-140500GmaAffx.90263.1.S1_s_atCF805988lipoxygenase-6e-6At3g22400LOX5C.G.S.X.
0.205e-140500GmaAffx.89259.1.S1_s_atCK605646lipoxygenase-1e+0At4g03330SYP123 (SYNTAXIN OF PLANTS 123)C.G.S.X.
0.187e-139496GmaAffx.91555.1.A1_s_atCF807280Cv. Williams 82 lipoxygenase-1e+0At5g09380DNA-directed RNA polymerase III RPC4 family proteinC.G.S.X.
0.471e-103379Gma.16500.1.S1_atBE059054--2e-5At1g55020LOX1C.G.S.X.
0.431e-84315Gma.8458.1.S1_atAY028297.1lipoxygenase-1e-5At1g55020LOX1C.G.S.X.
0.446e-84313Gma.1862.1.S1_atJ03211.1lipoxygenase-2-1e-4At1g55020LOX1C.G.S.X.
0.401e-72276Gma.15534.1.S1_atU50081.1lipoxygenase-3-4e-13At1g55020LOX1C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.052e-346Arabidopsis thalianaAt1g55020841944LOX1lipoxygenase, a defense gene conferring resistance Xanthomonas campestris---C.G.S.X.
0.013e+034Hordeum vulgareContig13499_atContig13499--5e+0Atmg01330-C.G.S.X.
0.021e-244Oryza sativaOs03g0699700AB099850.1-Lipoxygenase (EC 1.13.11.12) (Fragment)2e-2At1g55020LOX1C.G.S.X.
0.106e-1687Populus trichocarpaPtpAffx.223191.1.S1_atpmrna41065hypothetical protein-3e-18At1g55020LOX1C.G.S.X.
0.014e-138Triticum aestivumTaAffx.8039.1.S1_atCA638465--1e-1At4g37050PLP4 (PATATIN-LIKE PROTEIN 4)C.G.S.X.
0.051e-1067Vitis vinifera1613941_atCA818531hypothetical protein LOC100251097-2e+0At1g65390ATPP2-A5 (ARABIDOPSIS THALIANA PHLOEM PROTEIN 2 A5)C.G.S.X.
0.013e+034Zea maysZm.6821.1.A1_atAI396519hypothetical protein LOC100272815-7e+0At3g44805-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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